RetrogeneDB ID: | retro_ttru_629 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_2934:958730..959135(+) | ||
Located in intron of: | ENSTTRG00000010092 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL13A | ||
Ensembl ID: | ENSTTRG00000005485 | ||
Aliases: | None | ||
Description: | ribosomal protein L13a [Source:HGNC Symbol;Acc:10304] |
Percent Identity: | 87.41 % |
Parental protein coverage: | 66.5 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | GPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYL |
GPYHF.APS.IFWRTVRGMLPH.TKRGQAA.DRLKVFDGIPPPYDKK.RMVVPAALKVV.LKP.RKFAYL | |
Retrocopy | GPYHF*APSHIFWRTVRGMLPHRTKRGQAARDRLKVFDGIPPPYDKKQRMVVPAALKVVHLKPVRKFAYL |
Parental | GRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNIEKKIDRFTEVLKTHGFLV |
GRLA.EVGWKYQAVTATLEEK.KEKAKIHYRKKK.L.RL.KQA.KN.EKK.D.FTEV.KTHGFLV | |
Retrocopy | GRLAREVGWKYQAVTATLEEKTKEKAKIHYRKKKHLLRLQKQAKKNREKKTDKFTEVPKTHGFLV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |