RetrogeneDB ID: | retro_vpac_262 | ||
Retrocopylocation | Organism: | Alpaca (Vicugna pacos) | |
Coordinates: | GeneScaffold_3436:613245..613473(+) | ||
Located in intron of: | ENSVPAG00000007150 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NDUFA4 | ||
Ensembl ID: | ENSVPAG00000010003 | ||
Aliases: | None | ||
Description: | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa [Source:HGNC Symbol;Acc:7687] |
Percent Identity: | 73.68 % |
Parental protein coverage: | 92.68 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MFRHIVGQAKKHPSLIPLFLFIGGGGTGAVLYVLRLAMFNPDVSWDRKNNPEPWNKLGPNEQYKFYSVNV |
..R.I.G.AKKHPSL..LF..IG.G..GA.LYVLRLA.F.PDVSWDRKNNPEPW.KLGP..QYKFYSV.. | |
Retrocopy | ILRQIIG*AKKHPSLTLLFICIGVGSPGAMLYVLRLALFSPDVSWDRKNNPEPWDKLGPSDQYKFYSVTI |
Parental | DYSKLK |
DYSKLK | |
Retrocopy | DYSKLK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |