Parental gene:

RPS14, ENSECAG00000024336

Aliases:None
Description:ribosomal protein S14 [Source:HGNC Symbol;Acc:10387]
Organism:Horse (Equus caballus)
Coordinates:14:27581202..27587043(+)


>ENSECAG00000024336
ATGGCACCTCGCAAGGGAAAGGAAAAGAAGGAAGAACAGGTCATCAGCCTTGGACCTCAGGTGGCTGAAGGAGAAAATGT
ATTTGGTGTCTGCCACATCTTTGCATCCTTCAATGACACTTTTGTCCACGTCACCGATCTTTCCGGCAAGGAAACCATCT
GCCGTGTGACTGGTGGGATGAAGGTGAAGGCCGACCGAGATGAATCCTCTCCATATGCTGCCATGTTGGCTGCCCAGGAT
GTGGCCCAGAGGTGCAAGGAGCTGGGCATCACTGCCCTCCACATCAAACTCCGGGCCACGGGAGGAAACAGGACCAAGAC
CCCTGGGCCTGGGGCCCAGTCAGCCCTCAGAGCCCTTGCCCGCTCTGGAATGAAGATAGGGCGGATTGAGGATGTCACCC
CCATCCCCTCTGATAGCACCCGCAGGAAAGGGGGTCGCCGTGGTCGCCGTCTGTGA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 416 .53 RPM
SRP021940_embryo 423 .13 RPM
SRP021940_cerebellum 259 .40 RPM
SRP021940_testis 213 .51 RPM
SRP021940_placental_villous 279 .91 RPM
SRP021940_articular_cartilage 599 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004644 possible_ortholog 2 retrogenes
retro_amel_1390, retro_amel_524,
Bos taurus ENSBTAG00000008570 possible_ortholog 2 retrogenes
retro_btau_1109, retro_btau_213,
Canis familiaris ENSCAFG00000018094 possible_ortholog 2 retrogenes
retro_cfam_1589, retro_cfam_301,
Callithrix jacchus ENSCJAG00000020981 possible_ortholog 1 retrogene
retro_cjac_89,
Latimeria chalumnae ENSLACG00000016164 possible_ortholog 1 retrogene
retro_lcha_12,
Loxodonta africana ENSLAFG00000031195 possible_ortholog 2 retrogenes
retro_lafr_235, retro_lafr_67,
Myotis lucifugus ENSMLUG00000013279 possible_ortholog 4 retrogenes
retro_mluc_1837, retro_mluc_205, retro_mluc_2464, retro_mluc_2485,
Macaca mulatta ENSMMUG00000002848 possible_ortholog 5 retrogenes
retro_mmul_1921, retro_mmul_1983, retro_mmul_358, retro_mmul_570, retro_mmul_90,
Mustela putorius furo ENSMPUG00000013776 possible_ortholog 1 retrogene
retro_mputfur_127,
Nomascus leucogenys ENSNLEG00000010366 possible_ortholog 1 retrogene
retro_nleu_101,
Oryctolagus cuniculus ENSOCUG00000011509 ortholog_one2one 1 retrogene
retro_ocun_128,
Otolemur garnettii ENSOGAG00000000721 possible_ortholog 1 retrogene
retro_ogar_286,
Ochotona princeps ENSOPRG00000008422 ortholog_one2one 17 retrogenes
retro_opri_1012, retro_opri_1074, retro_opri_114, retro_opri_194, retro_opri_258, retro_opri_268, retro_opri_28, retro_opri_306, retro_opri_376, retro_opri_428, retro_opri_707, retro_opri_825, retro_opri_842, retro_opri_876, retro_opri_882, retro_opri_919, retro_opri_971,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_127 65.41 87.42
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2. retro_ecab_282 76.97 100.00
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3. retro_ecab_522 62.59 91.39
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Download FASTA sequences of all ENSECAG00000024336 retrocopies