Parental gene:

AP4S1, ENSEEUG00000013009

Aliases:None
Description:adaptor-related protein complex 4, sigma 1 subunit [Source:HGNC Symbol;Acc:575]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:scaffold_367271:6216..23581(-)


>ENSEEUG00000013009
ATGATAAAATTTTTCCTAATGGTGAATAAGCAAGGACAGACCCGACTTTCTAGGTACTATGAACATGTGGATATTAATAA
ACGTATACTTCTGGAAACAGAAGTTATAAAGAGCTGTCTCTCTCGATCCGAACAGTGCTCTTTCATTGAATATAAGGATT
TTAAGCTAGTTTATCGACAGTATGCAGCTCTCTTCATTGTGGTTGGAGTTAATGATGCTGAGAACGAGATGGCAGTTTAC
GAATTCATTCATAACTTTGTTGAAGTTTTAGATGAGTACTTCAGCCAAGTGAGTGAATTAGATGTATCCTTTTTCAACAC
TGTGAGCCAAGTTTCCCAGAGTACTTGGACAACTAGTCTTCGTCAG

Library Parental gene expression (RPM)
SRP017611_brain 8 .86 RPM
SRP017611_kidney 9 .56 RPM
SRP017611_liver 3 .05 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013301 ortholog_one2one 4 retrogenes
retro_chof_2345, retro_chof_2677, retro_chof_393, retro_chof_820,
Dipodomys ordii ENSDORG00000009468 ortholog_one2one 1 retrogene
retro_dord_595,
Homo sapiens ENSG00000100478 ortholog_one2one 1 retrogene
retro_hsap_3496,
Gorilla gorilla ENSGGOG00000003198 ortholog_one2one 1 retrogene
retro_ggor_2363,
Macaca mulatta ENSMMUG00000003123 ortholog_one2one 1 retrogene
retro_mmul_17,
Monodelphis domestica ENSMODG00000017579 ortholog_one2one 1 retrogene
retro_mdom_1774,
Nomascus leucogenys ENSNLEG00000015901 ortholog_one2one 1 retrogene
retro_nleu_788,
Ornithorhynchus anatinus ENSOANG00000014031 ortholog_one2one 1 retrogene
retro_oana_60,
Pongo abelii ENSPPYG00000005723 ortholog_one2many 1 retrogene
retro_pabe_2889,
Pan troglodytes ENSPTRG00000006239 ortholog_one2one 1 retrogene
retro_ptro_2368,
Pteropus vampyrus ENSPVAG00000017161 ortholog_one2one 1 retrogene
retro_pvam_1455,
Ictidomys tridecemlineatus ENSSTOG00000010759 ortholog_one2one 1 retrogene
retro_itri_1050,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_301 82.00 81.15
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Download FASTA sequences of all ENSEEUG00000013009 retrocopies