Parental gene:

AP4S1, ENSPVAG00000017161

Aliases:None
Description:adaptor-related protein complex 4, sigma 1 subunit [Source:HGNC Symbol;Acc:575]
Organism:Megabat (Pteropus vampyrus)
Coordinates:GeneScaffold_635:127399..139295(+)


>ENSPVAG00000017161
ATGATAAAATTTTTCCTCATGGTGAATAAACAAGGGCAGACCCGACTTTCTAAGTACTATGAACATGTGGAGATTAATAA
GCGTACACTTCTAGAAACAGAAGTCATAAAGAGCTGTCTCTCTCGATCCAATGAACAATGCTCCTTCATCGAATATAAGG
ATTTTAAGTTGGTGTATCGGCAGTATGCAGCTCTCTTCATTGTGGTTGGAGTTAATGACACTGAGAATGAGATGGCGATT
TATGAATTCATCCATAACTTCGTGGAAGTTTTAGACGAGTACTTCAGCCGAGTTAGTGAATTAGATGTATCCTTTAATGC
TGTAAGCCAAGTTTTTCGCAGTACTTGGCAAACACAGGCTAGTCTTGATCAGGAACCAACTGATGAGCTTCCCAAAATGT
GCTCAGCTCTGGACCCCCAGGTTTGCTGTTCTTCAGACAATTCATTCAAGGGAGCTGTGTCCACCCTCTTCTGCTAA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013301 ortholog_one2one 4 retrogenes
retro_chof_2345, retro_chof_2677, retro_chof_393, retro_chof_820,
Dipodomys ordii ENSDORG00000009468 ortholog_one2one 1 retrogene
retro_dord_595,
Erinaceus europaeus ENSEEUG00000013009 ortholog_one2one 1 retrogene
retro_eeur_301,
Homo sapiens ENSG00000100478 ortholog_one2one 1 retrogene
retro_hsap_3496,
Gorilla gorilla ENSGGOG00000003198 ortholog_one2one 1 retrogene
retro_ggor_2363,
Macaca mulatta ENSMMUG00000003123 ortholog_one2one 1 retrogene
retro_mmul_17,
Monodelphis domestica ENSMODG00000017579 ortholog_one2one 1 retrogene
retro_mdom_1774,
Nomascus leucogenys ENSNLEG00000015901 ortholog_one2one 1 retrogene
retro_nleu_788,
Ornithorhynchus anatinus ENSOANG00000014031 ortholog_one2one 1 retrogene
retro_oana_60,
Pongo abelii ENSPPYG00000005723 ortholog_one2many 1 retrogene
retro_pabe_2889,
Pan troglodytes ENSPTRG00000006239 ortholog_one2one 1 retrogene
retro_ptro_2368,
Pteropus vampyrus ENSPVAG00000010218 within_species_paralog 1 retrogene
retro_pvam_783,
Ictidomys tridecemlineatus ENSSTOG00000010759 ortholog_one2one 1 retrogene
retro_itri_1050,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_1455 51.58 58.86
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Download FASTA sequences of all ENSPVAG00000017161 retrocopies