Parental gene:

FTL, ENSG00000087086

Aliases:FTL, LFTD, NBIA3
Description:ferritin, light polypeptide [Source:HGNC Symbol;Acc:3999]
Organism:Human (Homo sapiens)
Coordinates:19:49468557..49470135(+)


>ENSG00000087086
ATGAGCTCCCAGATTCGTCAGAATTATTCCACCGACGTGGAGGCAGCCGTCAACAGCCTGGTCAATTTGTACCTGCAGGC
CTCCTACACCTACCTCTCTCTGGGCTTCTATTTCGACCGCGATGATGTGGCTCTGGAAGGCGTGAGCCACTTCTTCCGCG
AATTGGCCGAGGAGAAGCGCGAGGGCTACGAGCGTCTCCTGAAGATGCAAAACCAGCGTGGCGGCCGCGCTCTCTTCCAG
GACATCAAGAAGCCAGCTGAAGATGAGTGGGGTAAAACCCCAGACGCCATGAAAGCTGCCATGGCCCTGGAGAAAAAGCT
GAACCAGGCCCTTTTGGATCTTCATGCCCTGGGTTCTGCCCGCACGGACCCCCATCTCTGTGACTTCCTGGAGACTCACT
TCCTAGATGAGGAAGTGAAGCTTATCAAGAAGATGGGTGACCACCTGACCAACCTCCACAGGCTGGGTGGCCCGGAGGCT
GGGCTGGGCGAGTATCTCTTCGAAAGGCTCACTCTCAAGCACGACTAA

Library Parental gene expression (RPM)
bodymap2_liver 2015 .73 RPM
bodymap2_lung 2849 .70 RPM
bodymap2_breast 1738 .93 RPM
bodymap2_adipose 1863 .91 RPM
bodymap2_adrenal 1058 .95 RPM
bodymap2_skeletal_muscle 372 .14 RPM
bodymap2_thyroid 908 .10 RPM
bodymap2_prostate 1402 .23 RPM
bodymap2_colon 670 .92 RPM
bodymap2_testis 363 .05 RPM
bodymap2_brain 272 .02 RPM
bodymap2_heart 243 .78 RPM
bodymap2_white_blood_cells 1684 .33 RPM
bodymap2_lymph_node 1616 .52 RPM
bodymap2_ovary 779 .67 RPM
bodymap2_kidney 1729 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013343 possible_ortholog 33 retrogenes
Canis familiaris ENSCAFG00000003861 possible_ortholog 1 retrogene
Callithrix jacchus ENSCJAG00000000250 ortholog_one2many 13 retrogenes
Cavia porcellus ENSCPOG00000020558 possible_ortholog 1 retrogene
Dasypus novemcinctus ENSDNOG00000002455 possible_ortholog 9 retrogenes
Dasypus novemcinctus ENSDNOG00000004126 possible_ortholog 5 retrogenes
Dasypus novemcinctus ENSDNOG00000005577 possible_ortholog 36 retrogenes
Dasypus novemcinctus ENSDNOG00000007848 possible_ortholog 2 retrogenes
Dasypus novemcinctus ENSDNOG00000016683 possible_ortholog 8 retrogenes
Felis catus ENSFCAG00000003348 possible_ortholog 37 retrogenes
Homo sapiens ENSG00000167996 other_paralog 20 retrogenes
Gorilla gorilla ENSGGOG00000011999 ortholog_one2many 9 retrogenes
Loxodonta africana ENSLAFG00000031248 possible_ortholog 11 retrogenes
Macaca mulatta ENSMMUG00000003909 ortholog_one2one 9 retrogenes
Mustela putorius furo ENSMPUG00000003304 possible_ortholog 29 retrogenes
Mus musculus ENSMUSG00000050708 possible_ortholog 1 retrogene
Nomascus leucogenys ENSNLEG00000004716 ortholog_one2one 10 retrogenes
Oryctolagus cuniculus ENSOCUG00000000014 possible_ortholog 6 retrogenes
Pan troglodytes ENSPTRG00000011268 possible_ortholog 11 retrogenes
Rattus norvegicus ENSRNOG00000020843 possible_ortholog 7 retrogenes
Sus scrofa ENSSSCG00000003153 possible_ortholog 33 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000020639 possible_ortholog 7 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_431 67.23 100.00
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2. retro_hsap_929 67.23 99.43
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3. retro_hsap_1647 71.34 93.71
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4. retro_hsap_1955 74.53 60.57
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5. retro_hsap_2407 97.13 99.43
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6. retro_hsap_2484 69.79 54.29
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7. retro_hsap_2942 59.86 81.14
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8. retro_hsap_3842 70.56 100.00
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9. retro_hsap_4146 62.59 78.29
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10. retro_hsap_4665 89.71 100.00
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11. retro_hsap_4805 64.71 97.14
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Download FASTA sequences of all ENSG00000087086 retrocopies