Parental gene: | RPS5, ENSGGOG00000004258 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 19:55947383..55972656(+) |
>ENSGGOG00000004258
ATGACCGAGTGGGAGACAGCAGCACCAGCGGTGGCAGAGACCCCAGACATCAAGCTCTTTGGGAAGTGGAGCACCGATGA
TGTGCAGATCAATGACATTTCCCTGCAGGATTACATTGCAGTGAAGGAGAAGTATGCCAAGTACCTGCCTCACAGTGCAG
GGCGGTATGCCGCCAAACGCTTCCGCAAAGCTCAGTGTCCCATTGTGGAGCGCCTCACTAACTCCATGATGATGCACGGC
CGCAACAACGGCAAGAAGCTCATGACTGTGCGCATCGTCAAGCATGCCTTCGAGATCATACACCTGCTCACAGGCGAGAA
CCCTCTGCAGGTCCTGGTGAACGCCATCATCAACAGTGGTCCCCGGGAGGACTCCACACGCATTGGGCGCGCCGGGACTG
TGAGACGACAGGCTGTGGATGTGTCCCCCCTGCGCCGTGTGAACCAGGCCATCTGGCTGCTGTGCACAGGCGCTCGTGAG
GCTGCCTTCCGGAACATTAAGACCATTGCAGAGTGCCTGGCAGATGAGCTCATCAATGCTGCCAAGGGCTCCTCGAACTC
CTATGCCATTAAGAAGAAGGACGAGCTGGAGCGTGTGGCCAAGTCCAACCGCTGA
ATGACCGAGTGGGAGACAGCAGCACCAGCGGTGGCAGAGACCCCAGACATCAAGCTCTTTGGGAAGTGGAGCACCGATGA
TGTGCAGATCAATGACATTTCCCTGCAGGATTACATTGCAGTGAAGGAGAAGTATGCCAAGTACCTGCCTCACAGTGCAG
GGCGGTATGCCGCCAAACGCTTCCGCAAAGCTCAGTGTCCCATTGTGGAGCGCCTCACTAACTCCATGATGATGCACGGC
CGCAACAACGGCAAGAAGCTCATGACTGTGCGCATCGTCAAGCATGCCTTCGAGATCATACACCTGCTCACAGGCGAGAA
CCCTCTGCAGGTCCTGGTGAACGCCATCATCAACAGTGGTCCCCGGGAGGACTCCACACGCATTGGGCGCGCCGGGACTG
TGAGACGACAGGCTGTGGATGTGTCCCCCCTGCGCCGTGTGAACCAGGCCATCTGGCTGCTGTGCACAGGCGCTCGTGAG
GCTGCCTTCCGGAACATTAAGACCATTGCAGAGTGCCTGGCAGATGAGCTCATCAATGCTGCCAAGGGCTCCTCGAACTC
CTATGCCATTAAGAAGAAGGACGAGCTGGAGCGTGTGGCCAAGTCCAACCGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 93 .89 RPM |
| SRP007412_cerebellum | 103 .70 RPM |
| SRP007412_heart | 97 .75 RPM |
| SRP007412_kidney | 190 .54 RPM |
| SRP007412_liver | 313 .82 RPM |
| SRP007412_testis | 103 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000002366 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000000304 | ortholog_one2many | 6 retrogenes | |
| Echinops telfairi | ENSETEG00000013543 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000083845 | ortholog_one2one | 5 retrogenes | |
| Macropus eugenii | ENSMEUG00000015400 | ortholog_one2many | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000012641 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000008729 | ortholog_one2one | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000008308 | ortholog_one2many | 1 retrogene | |
| Ornithorhynchus anatinus | ENSOANG00000011921 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000013088 | ortholog_one2many | 2 retrogenes | |
| Procavia capensis | ENSPCAG00000011034 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000010500 | ortholog_one2one | 7 retrogenes | |
| Pan troglodytes | ENSPTRG00000011591 | ortholog_one2one | 6 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000005935 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000016955 | ortholog_one2many | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000000076 | ortholog_one2many | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000001991 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_1577 | 83.90 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_2465 | 93.75 | 94.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_2828 | 76.96 | 99.51 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_2942 | 70.80 | 54.90 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000004258 retrocopies