Parental gene:

RPL17-C18orf32, ENSMICG00000017102

Aliases:None
Description:RPL17-C18orf32 readthrough [Source:HGNC Symbol;Acc:44661]
Organism:Mouse Lemur (Microcebus murinus)
Coordinates:GeneScaffold_3802:11498..12967(-)


>ENSMICG00000017102
AACACTCGTGAAACTGCCCAGGCCATCAAGGGTATGCATATACGAAAAGCCACCAAGTATCTGAAAGATGTCACTTTAAA
GAAACAATGTGTACCATTCCGACGTTACAATGGTGGAGTTGGTAGGTGTGCCCAGGCCAAACAGTGGGGCTGGACACAGG
GTCGGTGGCCCAAGAAGAGTGCTGAATTTTTGCTGCACATGCTTAAAAATGCAGAGAGTAATGCTGAACTTAAGGGTTTG
GATGTAGATTCTCTGGTCATTGAGCATATCCAGGTGAACAAAGCACCCAAGATGCGTCGCCGAACTTACAGAGCTCATGG
TCGGATTAATATACATGAGTTCCCCCTGCCACATCGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009498 possible_ortholog 40 retrogenes
Bos taurus ENSBTAG00000022902 possible_ortholog 5 retrogenes
Canis familiaris ENSCAFG00000019044 possible_ortholog 7 retrogenes
Choloepus hoffmanni ENSCHOG00000007872 ortholog_one2one 50 retrogenes
Callithrix jacchus ENSCJAG00000004779 possible_ortholog 4 retrogenes
Cavia porcellus ENSCPOG00000019337 possible_ortholog 31 retrogenes
Echinops telfairi ENSETEG00000011322 ortholog_one2one 10 retrogenes
Felis catus ENSFCAG00000011342 possible_ortholog 43 retrogenes
Homo sapiens ENSG00000265681 possible_ortholog 33 retrogenes
Gorilla gorilla ENSGGOG00000026697 possible_ortholog 1 retrogene
Macropus eugenii ENSMEUG00000016709 ortholog_one2one 26 retrogenes
Myotis lucifugus ENSMLUG00000025554 possible_ortholog 22 retrogenes
Myotis lucifugus ENSMLUG00000029264 possible_ortholog 36 retrogenes
Monodelphis domestica ENSMODG00000003534 possible_ortholog 11 retrogenes
Mustela putorius furo ENSMPUG00000000801 possible_ortholog 7 retrogenes
Mus musculus ENSMUSG00000062328 possible_ortholog 80 retrogenes
Oryctolagus cuniculus ENSOCUG00000012485 possible_ortholog 2 retrogenes
Procavia capensis ENSPCAG00000003103 ortholog_one2one 8 retrogenes
Pongo abelii ENSPPYG00000009151 ortholog_one2one 43 retrogenes
Pteropus vampyrus ENSPVAG00000001969 ortholog_one2one 76 retrogenes
Rattus norvegicus ENSRNOG00000018680 possible_ortholog 48 retrogenes
Tarsius syrichta ENSTSYG00000007402 ortholog_one2one 20 retrogenes
Tursiops truncatus ENSTTRG00000005797 ortholog_one2one 31 retrogenes
Vicugna pacos ENSVPAG00000009568 ortholog_one2one 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmur_107 89.34 100.00
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2. retro_mmur_195 97.56 68.91
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3. retro_mmur_325 68.00 83.19
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4. retro_mmur_335 64.86 92.44
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5. retro_mmur_427 73.73 99.16
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6. retro_mmur_484 95.45 92.44
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7. retro_mmur_754 67.86 92.44
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8. retro_mmur_817 97.65 70.59
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9. retro_mmur_855 81.44 78.99
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10. retro_mmur_1046 91.60 100.00
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11. retro_mmur_1047 100.00 92.44
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12. retro_mmur_1305 99.09 92.44
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13. retro_mmur_1360 95.83 100.00
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14. retro_mmur_1614 98.18 92.44
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Download FASTA sequences of all ENSMICG00000017102 retrocopies