Parental gene:

RPL17, ENSBTAG00000022902

Aliases:RPL17, RPL17L
Description:60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:Q3T025]
Organism:Cow (Bos taurus)
Coordinates:24:49617410..49621972(-)


>ENSBTAG00000022902
ATGGTGCGCTATTCACTTGACCCAGAAAACCCCACAAAATCATGCAAATCAAGAGGTTCAAATCTTCGTGTTCATTTTAA
GAACACTCGTGAAACTGCCCAGGCCATAAAGGGTATGCATATCCGAAAAGCCACCAAGTATCTGAAGGATGTCACTTTAA
AGAAGCAATGTGTGCCATTCCGTCGTTACAACGGTGGAGTTGGTAGGTGTGCACAGGCTAAACAGTGGGGCTGGACGCAG
GGTCGGTGGCCCAAAAAGAGTGCTGAATTTTTACTACACATGCTCAAAAATGCAGAGAGTAATGCTGAACTTAAGGGCTT
AGATGTAGATTCTCTGGTCATTGAGCACATCCAAGTGAACAAAGCCCCCAAGATGCGGCGCAGGACTTACAGAGCTCACG
GTCGGATCAACCCCTACATGAGCTCTCCATGCCACATTGAGATGATCCTTACTGAAAAAGAACAGATTGTTCCTAAACCA
GAAGAGGAGGTTGCACAGAAGAAAAAGATATCCCAGAAGAAACTGAAGAAACAAAAACTTATGGCCCGGGAATAA

Library Parental gene expression (RPM)
SRP017611_brain 59 .43 RPM
SRP017611_kidney 130 .81 RPM
SRP017611_liver 47 .12 RPM
ERP005899_muscle 973 .33 RPM
ERP005899_liver 46 .07 RPM
SRP030211_testis 81 .13 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007872 possible_ortholog 50 retrogenes
Echinops telfairi ENSETEG00000011322 possible_ortholog 10 retrogenes
Homo sapiens ENSG00000215472 possible_ortholog 1 retrogene
Latimeria chalumnae ENSLACG00000008835 ortholog_one2many 1 retrogene
Macropus eugenii ENSMEUG00000016709 possible_ortholog 26 retrogenes
Microcebus murinus ENSMICG00000017102 possible_ortholog 14 retrogenes
Myotis lucifugus ENSMLUG00000025554 ortholog_one2many 22 retrogenes
Myotis lucifugus ENSMLUG00000029264 ortholog_one2many 36 retrogenes
Macaca mulatta ENSMMUG00000018837 possible_ortholog 26 retrogenes
Monodelphis domestica ENSMODG00000003534 ortholog_one2one 11 retrogenes
Oryctolagus cuniculus ENSOCUG00000012485 ortholog_one2many 2 retrogenes
Procavia capensis ENSPCAG00000003103 possible_ortholog 8 retrogenes
Pongo abelii ENSPPYG00000009151 possible_ortholog 43 retrogenes
Pteropus vampyrus ENSPVAG00000001969 possible_ortholog 76 retrogenes
Rattus norvegicus ENSRNOG00000018680 ortholog_one2one 48 retrogenes
Sarcophilus harrisii ENSSHAG00000003060 possible_ortholog 14 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000005193 ortholog_one2one 33 retrogenes
Tarsius syrichta ENSTSYG00000007402 possible_ortholog 20 retrogenes
Tursiops truncatus ENSTTRG00000005797 possible_ortholog 31 retrogenes
Vicugna pacos ENSVPAG00000009568 possible_ortholog 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_4 98.37 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_btau_50 100.00 100.00
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_btau_75 94.37 77.17
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_btau_164 91.21 98.91
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_btau_221 94.57 100.00
Please wait, loading
Please wait, loading
Please wait, loading

Download FASTA sequences of all ENSBTAG00000022902 retrocopies