Parental gene:

RPL17-C18orf32, ENSETEG00000011322

Aliases:None
Description:RPL17-C18orf32 readthrough [Source:HGNC Symbol;Acc:44661]
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:GeneScaffold_7290:350517..351727(-)


>ENSETEG00000011322
CTGCAAATCAAGAGGCGAACCTCCGGGTCCACTTCAAGTAACACCCGTGAAACGGCCCAGGCCATCAAAGGCATGCACAT
CCGGAAAGCCACCAAATACCTGAAAGACGTGACTGTGCAGAAGCAGTGTGTGCCTTTCCGACGCTACAAGGGTGGTGTTG
GTCGGTGTGCCCAGGCCAAACAGTGGGGTTGGACCCAGGGTCGGTGGCCCAAAAAGAGTGCTGAATTTTTGCTTCACATG
CTTAAAAATGCAGAAAGCAATGCTGAACTGAAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009498 possible_ortholog 40 retrogenes
Bos taurus ENSBTAG00000022902 possible_ortholog 5 retrogenes
Canis familiaris ENSCAFG00000019044 possible_ortholog 7 retrogenes
Choloepus hoffmanni ENSCHOG00000007872 ortholog_one2one 50 retrogenes
Callithrix jacchus ENSCJAG00000004779 possible_ortholog 4 retrogenes
Cavia porcellus ENSCPOG00000019337 possible_ortholog 31 retrogenes
Equus caballus ENSECAG00000011547 possible_ortholog 9 retrogenes
Felis catus ENSFCAG00000011342 possible_ortholog 43 retrogenes
Homo sapiens ENSG00000265681 possible_ortholog 33 retrogenes
Gorilla gorilla ENSGGOG00000026697 possible_ortholog 1 retrogene
Latimeria chalumnae ENSLACG00000008835 possible_ortholog 1 retrogene
Loxodonta africana ENSLAFG00000005569 possible_ortholog 16 retrogenes
Macropus eugenii ENSMEUG00000016709 ortholog_one2one 26 retrogenes
Microcebus murinus ENSMICG00000017102 ortholog_one2one 14 retrogenes
Myotis lucifugus ENSMLUG00000025554 possible_ortholog 22 retrogenes
Myotis lucifugus ENSMLUG00000029264 possible_ortholog 36 retrogenes
Monodelphis domestica ENSMODG00000003534 possible_ortholog 11 retrogenes
Mustela putorius furo ENSMPUG00000000801 possible_ortholog 7 retrogenes
Mus musculus ENSMUSG00000062328 possible_ortholog 80 retrogenes
Oryctolagus cuniculus ENSOCUG00000012485 possible_ortholog 2 retrogenes
Procavia capensis ENSPCAG00000003103 ortholog_one2one 8 retrogenes
Pongo abelii ENSPPYG00000009151 ortholog_one2one 43 retrogenes
Pan troglodytes ENSPTRG00000010012 possible_ortholog 51 retrogenes
Pteropus vampyrus ENSPVAG00000001969 ortholog_one2one 76 retrogenes
Rattus norvegicus ENSRNOG00000018680 possible_ortholog 48 retrogenes
Sarcophilus harrisii ENSSHAG00000003060 possible_ortholog 14 retrogenes
Sus scrofa ENSSSCG00000029642 possible_ortholog 30 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000005193 possible_ortholog 33 retrogenes
Tarsius syrichta ENSTSYG00000007402 ortholog_one2one 20 retrogenes
Tursiops truncatus ENSTTRG00000005797 ortholog_one2one 31 retrogenes
Vicugna pacos ENSVPAG00000009568 ortholog_one2one 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_207 52.94 72.53
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2. retro_etel_396 65.85 90.11
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3. retro_etel_470 59.78 97.80
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4. retro_etel_565 64.89 100.00
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5. retro_etel_831 70.59 92.31
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6. retro_etel_1787 63.74 100.00
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7. retro_etel_1810 69.05 90.11
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8. retro_etel_1900 67.02 100.00
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9. retro_etel_1936 67.82 94.51
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10. retro_etel_1954 54.26 100.00
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Download FASTA sequences of all ENSETEG00000011322 retrocopies