Parental gene:

RPL17-C18orf32, ENSPCAG00000003103

Aliases:None
Description:RPL17-C18orf32 readthrough [Source:HGNC Symbol;Acc:44661]
Organism:Hyrax (Procavia capensis)
Coordinates:GeneScaffold_7608:705..2251(-)


>ENSPCAG00000003103
AATACCCGTGAAACTGCCCAGGCCATCAAGGGTATGCATATCCGAAAAGCTACCAAGTATCTGAAAGATGTCACTTTGCA
GAAGCAGTGTGTGCCGTTCCGACGTTACAATGGTGGAGTTGGTAGGTGTGCCCAGGCCAAACAGTGGGGTTGGACACAGG
GTCGGTGGCCCAAAAAGAGTGCTGAATTTTTGCTCCACATGCTTAAAAATGCAGAGAGTAATGCTGAACTGAAGGGTTTA
GATGTGGATTCTCTGGTCATTGAGCACATCCAGGTGAACAAAGCCCCCAAGATGCGCCGCCGCACTTACAGAGCTCACGG
TCGAATTAACATACATGAGCTCGCCTTGCCATATTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009498 possible_ortholog 40 retrogenes
Bos taurus ENSBTAG00000022902 possible_ortholog 5 retrogenes
Canis familiaris ENSCAFG00000019044 possible_ortholog 7 retrogenes
Choloepus hoffmanni ENSCHOG00000007872 ortholog_one2one 50 retrogenes
Callithrix jacchus ENSCJAG00000004779 possible_ortholog 4 retrogenes
Cavia porcellus ENSCPOG00000019337 possible_ortholog 31 retrogenes
Echinops telfairi ENSETEG00000011322 ortholog_one2one 10 retrogenes
Felis catus ENSFCAG00000011342 possible_ortholog 43 retrogenes
Homo sapiens ENSG00000265681 possible_ortholog 33 retrogenes
Gorilla gorilla ENSGGOG00000026697 possible_ortholog 1 retrogene
Macropus eugenii ENSMEUG00000016709 ortholog_one2one 26 retrogenes
Microcebus murinus ENSMICG00000017102 ortholog_one2one 14 retrogenes
Myotis lucifugus ENSMLUG00000025554 possible_ortholog 22 retrogenes
Myotis lucifugus ENSMLUG00000029264 possible_ortholog 36 retrogenes
Monodelphis domestica ENSMODG00000003534 possible_ortholog 11 retrogenes
Mustela putorius furo ENSMPUG00000000801 possible_ortholog 7 retrogenes
Mus musculus ENSMUSG00000062328 possible_ortholog 80 retrogenes
Oryctolagus cuniculus ENSOCUG00000012485 possible_ortholog 2 retrogenes
Pongo abelii ENSPPYG00000009151 ortholog_one2one 43 retrogenes
Pteropus vampyrus ENSPVAG00000001969 ortholog_one2one 76 retrogenes
Rattus norvegicus ENSRNOG00000018680 possible_ortholog 48 retrogenes
Tarsius syrichta ENSTSYG00000007402 ortholog_one2one 20 retrogenes
Tursiops truncatus ENSTTRG00000005797 ortholog_one2one 31 retrogenes
Vicugna pacos ENSVPAG00000009568 ortholog_one2one 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pcap_52 52.21 93.22
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2. retro_pcap_193 67.26 93.22
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3. retro_pcap_196 60.53 94.92
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4. retro_pcap_197 71.05 94.92
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5. retro_pcap_200 74.55 93.22
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6. retro_pcap_206 80.00 93.22
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7. retro_pcap_250 65.96 78.81
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8. retro_pcap_363 86.36 92.37
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Download FASTA sequences of all ENSPCAG00000003103 retrocopies