Parental gene:

RPL17-C18orf32, ENSTTRG00000005797

Aliases:None
Description:RPL17-C18orf32 readthrough [Source:HGNC Symbol;Acc:44661]
Organism:Dolphin (Tursiops truncatus)
Coordinates:scaffold_110833:4785..6881(+)


>ENSTTRG00000005797
ATGCAAGTCGAGAGGCAAATCTTCGTGTTCACTTTAAGGAACACTCGTGAAACAGCCCAGGCCATTAAGGGTATGCATAT
CCGAAAAGCCACTAAGTATCTGAAGGATGTCACTTTAAAGAAGCAGTGTGTGCCATTCCGTCGCTACAATGGTGGAGTTG
GTAGGTGTGCCCAGGCCAAACAGTGGGGCTGGACACAGGGTCGGTGGCCCAAAAAGAGTGCTGAATTTTTACTGCACATG
CTCAAAAATGCAGAGAGTAATGCTGAACTTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNATGCGGCGCAGGACTTACAGAGCTCATGGTCGGATCAACATACATGAGCTCTCCGTGCCACATTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009498 possible_ortholog 40 retrogenes
retro_amel_1147, retro_amel_1150, retro_amel_1252, retro_amel_1273, retro_amel_132, retro_amel_1422, retro_amel_1435, retro_amel_1487, retro_amel_1541, retro_amel_156, retro_amel_1567, retro_amel_1582, retro_amel_1599, retro_amel_1622, retro_amel_1624, retro_amel_1652, retro_amel_1703, retro_amel_1704, retro_amel_1743, retro_amel_1757, retro_amel_184, retro_amel_1908, retro_amel_1922, retro_amel_208, retro_amel_359, retro_amel_401, retro_amel_425, retro_amel_426, retro_amel_452, retro_amel_486, retro_amel_589, retro_amel_731, retro_amel_736, retro_amel_780, retro_amel_820, retro_amel_834, retro_amel_865, retro_amel_950, retro_amel_953, retro_amel_980,
Bos taurus ENSBTAG00000022902 possible_ortholog 5 retrogenes
retro_btau_164, retro_btau_221, retro_btau_4, retro_btau_50, retro_btau_75,
Canis familiaris ENSCAFG00000019044 possible_ortholog 7 retrogenes
retro_cfam_102, retro_cfam_171, retro_cfam_175, retro_cfam_189, retro_cfam_2, retro_cfam_239, retro_cfam_34,
Choloepus hoffmanni ENSCHOG00000007872 ortholog_one2one 50 retrogenes
retro_chof_1020, retro_chof_1021, retro_chof_107, retro_chof_1232, retro_chof_130, retro_chof_137, retro_chof_1405, retro_chof_1432, retro_chof_1448, retro_chof_1453, retro_chof_1471, retro_chof_1475, retro_chof_153, retro_chof_1634, retro_chof_1671, retro_chof_1678, retro_chof_1754, retro_chof_1786, retro_chof_187, retro_chof_1871, retro_chof_1895, retro_chof_1901, retro_chof_1908, retro_chof_2038, retro_chof_204, retro_chof_2133, retro_chof_2140, retro_chof_221, retro_chof_2243, retro_chof_2415, retro_chof_2458, retro_chof_246, retro_chof_2489, retro_chof_2534, retro_chof_2570, retro_chof_2610, retro_chof_2640, retro_chof_463, retro_chof_507, retro_chof_564, retro_chof_65, retro_chof_690, retro_chof_716, retro_chof_759, retro_chof_775, retro_chof_798, retro_chof_875, retro_chof_899, retro_chof_945, retro_chof_953,
Callithrix jacchus ENSCJAG00000004779 possible_ortholog 4 retrogenes
retro_cjac_122, retro_cjac_248, retro_cjac_360, retro_cjac_376,
Cavia porcellus ENSCPOG00000019337 possible_ortholog 31 retrogenes
retro_cpor_1004, retro_cpor_1005, retro_cpor_1015, retro_cpor_1050, retro_cpor_1083, retro_cpor_1118, retro_cpor_1125, retro_cpor_1227, retro_cpor_1271, retro_cpor_1305, retro_cpor_1413, retro_cpor_1455, retro_cpor_1539, retro_cpor_159, retro_cpor_213, retro_cpor_238, retro_cpor_272, retro_cpor_319, retro_cpor_374, retro_cpor_50, retro_cpor_521, retro_cpor_662, retro_cpor_675, retro_cpor_776, retro_cpor_784, retro_cpor_792, retro_cpor_827, retro_cpor_872, retro_cpor_924, retro_cpor_943, retro_cpor_955,
Echinops telfairi ENSETEG00000011322 ortholog_one2one 10 retrogenes
retro_etel_1787, retro_etel_1810, retro_etel_1900, retro_etel_1936, retro_etel_1954, retro_etel_207, retro_etel_396, retro_etel_470, retro_etel_565, retro_etel_831,
Felis catus ENSFCAG00000011342 possible_ortholog 43 retrogenes
retro_fcat_1002, retro_fcat_1004, retro_fcat_1019, retro_fcat_1050, retro_fcat_1065, retro_fcat_1196, retro_fcat_1235, retro_fcat_1300, retro_fcat_1322, retro_fcat_1426, retro_fcat_1427, retro_fcat_1432, retro_fcat_1516, retro_fcat_1525, retro_fcat_1539, retro_fcat_1552, retro_fcat_1588, retro_fcat_1655, retro_fcat_1692, retro_fcat_1699, retro_fcat_1703, retro_fcat_1740, retro_fcat_1746, retro_fcat_1821, retro_fcat_1864, retro_fcat_1892, retro_fcat_1917, retro_fcat_2023, retro_fcat_211, retro_fcat_264, retro_fcat_360, retro_fcat_461, retro_fcat_481, retro_fcat_488, retro_fcat_532, retro_fcat_607, retro_fcat_734, retro_fcat_791, retro_fcat_808, retro_fcat_855, retro_fcat_900, retro_fcat_917, retro_fcat_988,
Homo sapiens ENSG00000265681 possible_ortholog 33 retrogenes
retro_hsap_1158, retro_hsap_1382, retro_hsap_1423, retro_hsap_1448, retro_hsap_1590, retro_hsap_172, retro_hsap_1728, retro_hsap_1751, retro_hsap_1783, retro_hsap_181, retro_hsap_1893, retro_hsap_1938, retro_hsap_202, retro_hsap_2149, retro_hsap_2398, retro_hsap_2457, retro_hsap_2491, retro_hsap_2582, retro_hsap_2786, retro_hsap_2905, retro_hsap_2933, retro_hsap_295, retro_hsap_3176, retro_hsap_3475, retro_hsap_356, retro_hsap_3620, retro_hsap_3798, retro_hsap_3932, retro_hsap_3943, retro_hsap_3967, retro_hsap_3988, retro_hsap_714, retro_hsap_735,
Gorilla gorilla ENSGGOG00000026697 possible_ortholog 1 retrogene
retro_ggor_167,
Macropus eugenii ENSMEUG00000016709 ortholog_one2one 26 retrogenes
retro_meug_1111, retro_meug_127, retro_meug_1285, retro_meug_1485, retro_meug_1821, retro_meug_188, retro_meug_1886, retro_meug_191, retro_meug_204, retro_meug_2159, retro_meug_2167, retro_meug_2183, retro_meug_257, retro_meug_326, retro_meug_355, retro_meug_373, retro_meug_410, retro_meug_413, retro_meug_509, retro_meug_58, retro_meug_703, retro_meug_738, retro_meug_740, retro_meug_779, retro_meug_81, retro_meug_934,
Microcebus murinus ENSMICG00000017102 ortholog_one2one 14 retrogenes
retro_mmur_1046, retro_mmur_1047, retro_mmur_107, retro_mmur_1305, retro_mmur_1360, retro_mmur_1614, retro_mmur_195, retro_mmur_325, retro_mmur_335, retro_mmur_427, retro_mmur_484, retro_mmur_754, retro_mmur_817, retro_mmur_855,
Myotis lucifugus ENSMLUG00000025554 possible_ortholog 22 retrogenes
retro_mluc_1141, retro_mluc_1224, retro_mluc_1300, retro_mluc_1375, retro_mluc_1468, retro_mluc_1500, retro_mluc_1547, retro_mluc_1579, retro_mluc_1739, retro_mluc_1755, retro_mluc_1822, retro_mluc_1870, retro_mluc_1959, retro_mluc_2018, retro_mluc_2027, retro_mluc_2036, retro_mluc_2059, retro_mluc_2165, retro_mluc_2198, retro_mluc_719, retro_mluc_835, retro_mluc_929,
Myotis lucifugus ENSMLUG00000029264 possible_ortholog 36 retrogenes
retro_mluc_1043, retro_mluc_1060, retro_mluc_1061, retro_mluc_1081, retro_mluc_1094, retro_mluc_1163, retro_mluc_1193, retro_mluc_1206, retro_mluc_123, retro_mluc_1230, retro_mluc_1241, retro_mluc_1416, retro_mluc_157, retro_mluc_1581, retro_mluc_1652, retro_mluc_1677, retro_mluc_1693, retro_mluc_170, retro_mluc_1711, retro_mluc_1848, retro_mluc_1890, retro_mluc_2003, retro_mluc_2064, retro_mluc_2095, retro_mluc_2125, retro_mluc_2387, retro_mluc_2636, retro_mluc_2637, retro_mluc_661, retro_mluc_734, retro_mluc_763, retro_mluc_779, retro_mluc_785, retro_mluc_807, retro_mluc_938, retro_mluc_977,
Monodelphis domestica ENSMODG00000003534 possible_ortholog 11 retrogenes
retro_mdom_1153, retro_mdom_1194, retro_mdom_1437, retro_mdom_1734, retro_mdom_1783, retro_mdom_1980, retro_mdom_321, retro_mdom_337, retro_mdom_491, retro_mdom_541, retro_mdom_91,
Mustela putorius furo ENSMPUG00000000801 possible_ortholog 7 retrogenes
retro_mputfur_1008, retro_mputfur_126, retro_mputfur_1349, retro_mputfur_16, retro_mputfur_184, retro_mputfur_40, retro_mputfur_536,
Mus musculus ENSMUSG00000062328 possible_ortholog 80 retrogenes
retro_mmus_1002, retro_mmus_1004, retro_mmus_1011, retro_mmus_1024, retro_mmus_1032, retro_mmus_1040, retro_mmus_1042, retro_mmus_1087, retro_mmus_1138, retro_mmus_1205, retro_mmus_1208, retro_mmus_1218, retro_mmus_1222, retro_mmus_1226, retro_mmus_1259, retro_mmus_1263, retro_mmus_1308, retro_mmus_1346, retro_mmus_1395, retro_mmus_1404, retro_mmus_1484, retro_mmus_1499, retro_mmus_1502, retro_mmus_1710, retro_mmus_1840, retro_mmus_1842, retro_mmus_1935, retro_mmus_201, retro_mmus_2016, retro_mmus_2034, retro_mmus_2076, retro_mmus_2099, retro_mmus_2124, retro_mmus_2156, retro_mmus_2203, retro_mmus_2261, retro_mmus_2262, retro_mmus_2343, retro_mmus_2345, retro_mmus_243, retro_mmus_2468, retro_mmus_2550, retro_mmus_2613, retro_mmus_2634, retro_mmus_2724, retro_mmus_2759, retro_mmus_2773, retro_mmus_2775, retro_mmus_288, retro_mmus_2919, retro_mmus_3003, retro_mmus_302, retro_mmus_3037, retro_mmus_3049, retro_mmus_310, retro_mmus_311, retro_mmus_314, retro_mmus_327, retro_mmus_334, retro_mmus_3354, retro_mmus_337, retro_mmus_3490, retro_mmus_3601, retro_mmus_3687, retro_mmus_388, retro_mmus_419, retro_mmus_420, retro_mmus_523, retro_mmus_525, retro_mmus_529, retro_mmus_661, retro_mmus_673, retro_mmus_741, retro_mmus_773, retro_mmus_828, retro_mmus_871, retro_mmus_879, retro_mmus_922, retro_mmus_948, retro_mmus_966,
Oryctolagus cuniculus ENSOCUG00000012485 possible_ortholog 2 retrogenes
retro_ocun_1433, retro_ocun_231,
Procavia capensis ENSPCAG00000003103 ortholog_one2one 8 retrogenes
retro_pcap_193, retro_pcap_196, retro_pcap_197, retro_pcap_200, retro_pcap_206, retro_pcap_250, retro_pcap_363, retro_pcap_52,
Pongo abelii ENSPPYG00000009151 ortholog_one2one 43 retrogenes
retro_pabe_1177, retro_pabe_1178, retro_pabe_1179, retro_pabe_1197, retro_pabe_1373, retro_pabe_1408, retro_pabe_1448, retro_pabe_1464, retro_pabe_1531, retro_pabe_1565, retro_pabe_1574, retro_pabe_1725, retro_pabe_1807, retro_pabe_1832, retro_pabe_1902, retro_pabe_2052, retro_pabe_2053, retro_pabe_2088, retro_pabe_2102, retro_pabe_2164, retro_pabe_2231, retro_pabe_2317, retro_pabe_2520, retro_pabe_2635, retro_pabe_2638, retro_pabe_2871, retro_pabe_2917, retro_pabe_2921, retro_pabe_2971, retro_pabe_3020, retro_pabe_3029, retro_pabe_3103, retro_pabe_3187, retro_pabe_3248, retro_pabe_3253, retro_pabe_3262, retro_pabe_3277, retro_pabe_347, retro_pabe_3493, retro_pabe_539, retro_pabe_567, retro_pabe_617, retro_pabe_882,
Pteropus vampyrus ENSPVAG00000001969 ortholog_one2one 76 retrogenes
retro_pvam_1003, retro_pvam_1005, retro_pvam_1020, retro_pvam_1036, retro_pvam_1037, retro_pvam_104, retro_pvam_1042, retro_pvam_1085, retro_pvam_1093, retro_pvam_1105, retro_pvam_1155, retro_pvam_1162, retro_pvam_1186, retro_pvam_1194, retro_pvam_1204, retro_pvam_1218, retro_pvam_1279, retro_pvam_1336, retro_pvam_1338, retro_pvam_1351, retro_pvam_1366, retro_pvam_1372, retro_pvam_138, retro_pvam_1392, retro_pvam_1397, retro_pvam_1407, retro_pvam_1409, retro_pvam_142, retro_pvam_143, retro_pvam_1452, retro_pvam_1454, retro_pvam_182, retro_pvam_206, retro_pvam_220, retro_pvam_263, retro_pvam_268, retro_pvam_278, retro_pvam_292, retro_pvam_309, retro_pvam_339, retro_pvam_348, retro_pvam_395, retro_pvam_40, retro_pvam_402, retro_pvam_417, retro_pvam_424, retro_pvam_439, retro_pvam_442, retro_pvam_455, retro_pvam_464, retro_pvam_497, retro_pvam_520, retro_pvam_55, retro_pvam_571, retro_pvam_577, retro_pvam_584, retro_pvam_588, retro_pvam_596, retro_pvam_604, retro_pvam_608, retro_pvam_654, retro_pvam_659, retro_pvam_684, retro_pvam_700, retro_pvam_701, retro_pvam_705, retro_pvam_712, retro_pvam_716, retro_pvam_726, retro_pvam_751, retro_pvam_756, retro_pvam_777, retro_pvam_862, retro_pvam_88, retro_pvam_925, retro_pvam_966,
Rattus norvegicus ENSRNOG00000018680 possible_ortholog 48 retrogenes
retro_rnor_1028, retro_rnor_1146, retro_rnor_1256, retro_rnor_1281, retro_rnor_1297, retro_rnor_1419, retro_rnor_1469, retro_rnor_1470, retro_rnor_1495, retro_rnor_1504, retro_rnor_1533, retro_rnor_1587, retro_rnor_1603, retro_rnor_1629, retro_rnor_1678, retro_rnor_1856, retro_rnor_1900, retro_rnor_1902, retro_rnor_1911, retro_rnor_1912, retro_rnor_1942, retro_rnor_1980, retro_rnor_2011, retro_rnor_218, retro_rnor_2243, retro_rnor_2348, retro_rnor_242, retro_rnor_2519, retro_rnor_2570, retro_rnor_2572, retro_rnor_2634, retro_rnor_2796, retro_rnor_419, retro_rnor_441, retro_rnor_554, retro_rnor_613, retro_rnor_667, retro_rnor_738, retro_rnor_762, retro_rnor_774, retro_rnor_803, retro_rnor_815, retro_rnor_837, retro_rnor_877, retro_rnor_932, retro_rnor_934, retro_rnor_972, retro_rnor_982,
Tarsius syrichta ENSTSYG00000007402 ortholog_one2one 20 retrogenes
retro_tsyr_1042, retro_tsyr_1298, retro_tsyr_1349, retro_tsyr_1416, retro_tsyr_1555, retro_tsyr_159, retro_tsyr_180, retro_tsyr_1801, retro_tsyr_1940, retro_tsyr_2021, retro_tsyr_2053, retro_tsyr_2088, retro_tsyr_253, retro_tsyr_304, retro_tsyr_693, retro_tsyr_752, retro_tsyr_77, retro_tsyr_819, retro_tsyr_860, retro_tsyr_868,
Vicugna pacos ENSVPAG00000009568 ortholog_one2one 1 retrogene
retro_vpac_10,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_49 70.65 69.47
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2. retro_ttru_178 75.19 97.71
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3. retro_ttru_193 64.39 100.00
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4. retro_ttru_232 77.52 97.71
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5. retro_ttru_264 70.59 77.86
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6. retro_ttru_299 66.92 98.47
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7. retro_ttru_447 71.65 96.18
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8. retro_ttru_568 61.26 84.73
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9. retro_ttru_609 71.54 97.71
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10. retro_ttru_627 67.69 97.71
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11. retro_ttru_636 70.54 97.71
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12. retro_ttru_660 64.34 97.71
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13. retro_ttru_691 73.08 97.71
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14. retro_ttru_703 62.81 91.60
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15. retro_ttru_747 62.22 68.70
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16. retro_ttru_800 75.97 97.71
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17. retro_ttru_836 74.42 97.71
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18. retro_ttru_884 70.54 97.71
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19. retro_ttru_992 71.32 97.71
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20. retro_ttru_1153 64.35 85.50
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21. retro_ttru_1338 70.49 91.60
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22. retro_ttru_1374 67.69 97.71
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23. retro_ttru_1436 54.62 97.71
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24. retro_ttru_1509 70.54 97.71
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25. retro_ttru_1716 66.67 67.94
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26. retro_ttru_1757 74.42 97.71
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27. retro_ttru_1784 82.80 69.47
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28. retro_ttru_1811 73.28 97.71
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29. retro_ttru_1854 75.97 97.71
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30. retro_ttru_1856 73.85 97.71
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31. retro_ttru_1932 74.42 97.71
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Download FASTA sequences of all ENSTTRG00000005797 retrocopies