Parental gene:

CBX3, ENSNLEG00000014931

Aliases:None
Description:None
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397330.1:6050185..6061800(+)


>ENSNLEG00000014931
ATGGCCTCCAATAAAACTACATTGCAAAAAATGGGAAAAAAACAGAATGGAAAGAGTAAAAAAGTTGAAGAGGCAGAGCC
TGAAGAATTTGTGGTGGAAAAAGTACTAGATCGACGTGTAGTGAATGGGAAAGTAGAATATTTCCTGAAGTGGAAGGGAT
TTACAGATGCTGACAATACTTGGGAACCTGAAGAAAATTTAGATTGTCCAGAATTGATTGAAGCGTTTCTTAACTCTCAG
AAAGCTGGCAAAGAAAAAGATGGTACAAAGAGAAAATCTTTATCTGACAGTGAATCTGATGACAGCAAATCAAAGAAGAA
AAGAGATGCTGCTGACAAACCAAGAGGATTTGCCAGAGGTCTTGATCCTGAAAGAATAATTGGTGCCACAGACAGCAGTG
GAGAATTGATGTTTCTCATGAAATGGAAAGATTCAGATGAGGCAGACTTGGTTCTGGCAAAAGAGGCAAATATGAAGTGT
CCTCAAATTGTAATTGCTTTTTATGAAGAGAGACTAACTTGGCATTCTTGTCCAGAAGATGAAGCTCAATAA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013843 ortholog_one2one 22 retrogenes
retro_chof_1128, retro_chof_1147, retro_chof_1156, retro_chof_1178, retro_chof_1210, retro_chof_1223, retro_chof_132, retro_chof_1569, retro_chof_1672, retro_chof_1779, retro_chof_1863, retro_chof_1962, retro_chof_222, retro_chof_2269, retro_chof_2347, retro_chof_2379, retro_chof_2435, retro_chof_2695, retro_chof_411, retro_chof_676, retro_chof_87, retro_chof_936,
Cavia porcellus ENSCPOG00000015168 ortholog_one2one 1 retrogene
retro_cpor_66,
Felis catus ENSFCAG00000015224 possible_ortholog 6 retrogenes
retro_fcat_1005, retro_fcat_1103, retro_fcat_1485, retro_fcat_1519, retro_fcat_336, retro_fcat_473,
Homo sapiens ENSG00000122565 ortholog_one2one 9 retrogenes
retro_hsap_1071, retro_hsap_1145, retro_hsap_1902, retro_hsap_2332, retro_hsap_2771, retro_hsap_3368, retro_hsap_3650, retro_hsap_766, retro_hsap_910,
Nomascus leucogenys ENSNLEG00000002435 within_species_paralog 4 retrogenes
retro_nleu_1089, retro_nleu_1105, retro_nleu_1955, retro_nleu_2961,
Nomascus leucogenys ENSNLEG00000017671 within_species_paralog 1 retrogene
retro_nleu_428,
Ochotona princeps ENSOPRG00000011713 ortholog_one2one 9 retrogenes
retro_opri_103, retro_opri_159, retro_opri_209, retro_opri_300, retro_opri_429, retro_opri_569, retro_opri_598, retro_opri_728, retro_opri_733,
Sorex araneus ENSSARG00000008011 ortholog_one2one 2 retrogenes
retro_sara_496, retro_sara_709,
Sarcophilus harrisii ENSSHAG00000017913 ortholog_one2one 1 retrogene
retro_shar_153,
Sus scrofa ENSSSCG00000016711 ortholog_one2one 4 retrogenes
retro_sscr_1031, retro_sscr_204, retro_sscr_420, retro_sscr_755,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_141 80.87 100.00
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2. retro_nleu_373 64.60 86.89
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3. retro_nleu_397 91.58 51.37
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4. retro_nleu_511 96.95 88.52
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5. retro_nleu_676 74.26 55.19
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6. retro_nleu_944 89.27 96.17
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7. retro_nleu_964 77.33 81.42
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8. retro_nleu_1685 74.31 78.69
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9. retro_nleu_2462 84.04 51.37
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Download FASTA sequences of all ENSNLEG00000014931 retrocopies