RetrogeneDB - Parental gene ENSOPRG00000008821 details

							
>ENSOPRG00000008821
ATGGCCAAGTCCAAGAACCACACCACACACAACCAGTCCCGAAAGTGGCACAGAAATGGCATCAAGAAGCCCCGATCACA

AAGATACGAATCTCTTAAAGGGGTGGACCCCAAGTTCCTGAGGAACATGCGCTTTGCCAAGAAGCACAACAAGAAGGGCC

TGAAGAAGATGCAGGCCAACAACGCCAAGGCCATGAGTGCACGGGCCGAGGCTATCAAGGCCATCGTCAAACCCAAGGAC

GTGAAGCCCACCATCCCCAAGGGAGTCAGCCGCAAGCTCGATCGACTTGCCTACATCGCCCACCCCAAGCTCGGGAAGCG

TGCTCGTGCCCGCATGGCCAGTGGTGTCAGGCTGGCCCGGGCAAAGGCCAAGGCAAAGGCTAAGACCGAGCCTCAGATTA

AGGCCCAGGCTGCACCCACAGCAGCTGCTCCAGCTCAGCCATCTCCCAAAGGTGCCCAGCCCCCCACAAAGGCTCAGTGA

Species	Parental gene accession	Homology type	Retrogenes number
Ailuropoda melanoleuca	ENSAMEG00000009163	possible_ortholog	6 retrogenes	retro_amel_1373, retro_amel_1740, retro_amel_345, retro_amel_379, retro_amel_686, retro_amel_913,
Callithrix jacchus	ENSCJAG00000005951	ortholog_one2many	9 retrogenes	retro_cjac_135, retro_cjac_160, retro_cjac_241, retro_cjac_29, retro_cjac_331, retro_cjac_348, retro_cjac_358, retro_cjac_73, retro_cjac_96,
Felis catus	ENSFCAG00000001762	possible_ortholog	9 retrogenes	retro_fcat_1032, retro_fcat_1132, retro_fcat_1753, retro_fcat_1774, retro_fcat_1897, retro_fcat_249, retro_fcat_485, retro_fcat_687, retro_fcat_952,
Homo sapiens	ENSG00000162244	ortholog_one2one	23 retrogenes	retro_hsap_1098, retro_hsap_1146, retro_hsap_123, retro_hsap_1283, retro_hsap_1406, retro_hsap_1587, retro_hsap_170, retro_hsap_1759, retro_hsap_2053, retro_hsap_2358, retro_hsap_263, retro_hsap_2772, retro_hsap_2899, retro_hsap_3201, retro_hsap_3289, retro_hsap_3316, retro_hsap_3511, retro_hsap_3562, retro_hsap_3951, retro_hsap_3998, retro_hsap_4304, retro_hsap_863, retro_hsap_882,
Gorilla gorilla	ENSGGOG00000024691	ortholog_one2many	16 retrogenes	retro_ggor_1007, retro_ggor_1090, retro_ggor_1205, retro_ggor_1315, retro_ggor_1330, retro_ggor_142, retro_ggor_1480, retro_ggor_1929, retro_ggor_224, retro_ggor_2247, retro_ggor_254, retro_ggor_2684, retro_ggor_312, retro_ggor_715, retro_ggor_863, retro_ggor_892,
Microcebus murinus	ENSMICG00000002705	possible_ortholog	9 retrogenes	retro_mmur_192, retro_mmur_198, retro_mmur_303, retro_mmur_446, retro_mmur_508, retro_mmur_519, retro_mmur_657, retro_mmur_816, retro_mmur_938,
Myotis lucifugus	ENSMLUG00000015088	possible_ortholog	14 retrogenes	retro_mluc_1086, retro_mluc_1160, retro_mluc_134, retro_mluc_1377, retro_mluc_1699, retro_mluc_1955, retro_mluc_2228, retro_mluc_2522, retro_mluc_2523, retro_mluc_2575, retro_mluc_297, retro_mluc_421, retro_mluc_889, retro_mluc_915,
Macaca mulatta	ENSMMUG00000019248	ortholog_one2many	2 retrogenes	retro_mmul_1352, retro_mmul_218,
Monodelphis domestica	ENSMODG00000028750	ortholog_one2many	17 retrogenes	retro_mdom_1013, retro_mdom_1187, retro_mdom_1201, retro_mdom_1328, retro_mdom_1445, retro_mdom_1452, retro_mdom_1505, retro_mdom_1532, retro_mdom_1604, retro_mdom_1665, retro_mdom_1904, retro_mdom_35, retro_mdom_504, retro_mdom_589, retro_mdom_612, retro_mdom_639, retro_mdom_995,
Mustela putorius furo	ENSMPUG00000011734	possible_ortholog	6 retrogenes	retro_mputfur_137, retro_mputfur_187, retro_mputfur_370, retro_mputfur_467, retro_mputfur_816, retro_mputfur_970,
Mus musculus	ENSMUSG00000048758	possible_ortholog	3 retrogenes	retro_mmus_203, retro_mmus_231, retro_mmus_86,
Otolemur garnettii	ENSOGAG00000013766	possible_ortholog	2 retrogenes	retro_ogar_290, retro_ogar_31,
Pongo abelii	ENSPPYG00000013818	ortholog_one2one	21 retrogenes	retro_pabe_1062, retro_pabe_1162, retro_pabe_1306, retro_pabe_1503, retro_pabe_1714, retro_pabe_1882, retro_pabe_2125, retro_pabe_2131, retro_pabe_2398, retro_pabe_2718, retro_pabe_2952, retro_pabe_3254, retro_pabe_3284, retro_pabe_3504, retro_pabe_3525, retro_pabe_404, retro_pabe_459, retro_pabe_491, retro_pabe_673, retro_pabe_687, retro_pabe_911,
Rattus norvegicus	ENSRNOG00000011138	possible_ortholog	15 retrogenes	retro_rnor_1045, retro_rnor_1158, retro_rnor_1161, retro_rnor_1422, retro_rnor_1702, retro_rnor_184, retro_rnor_1951, retro_rnor_2207, retro_rnor_2222, retro_rnor_2356, retro_rnor_2561, retro_rnor_338, retro_rnor_397, retro_rnor_63, retro_rnor_928,
Sorex araneus	ENSSARG00000013572	possible_ortholog	8 retrogenes	retro_sara_108, retro_sara_309, retro_sara_329, retro_sara_347, retro_sara_400, retro_sara_53, retro_sara_637, retro_sara_669,
Sarcophilus harrisii	ENSSHAG00000006854	ortholog_one2one	2 retrogenes	retro_shar_355, retro_shar_444,
Ictidomys tridecemlineatus	ENSSTOG00000020488	possible_ortholog	14 retrogenes	retro_itri_1345, retro_itri_1433, retro_itri_1482, retro_itri_1586, retro_itri_1664, retro_itri_1667, retro_itri_194, retro_itri_482, retro_itri_520, retro_itri_592, retro_itri_622, retro_itri_874, retro_itri_934, retro_itri_942,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_opri_69	66.67	86.16	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_opri_99	66.94	76.10	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_opri_277	64.60	100.00	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_opri_373	64.60	100.00	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_opri_535	61.11	100.00	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_opri_607	66.94	76.10	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_opri_700	56.34	87.42	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_opri_877	73.13	84.28	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_opri_983	66.67	86.16	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_opri_1166	65.56	55.97	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSOPRG00000008821 retrocopies

Parental gene:	RPL29, ENSOPRG00000008821
Aliases:	None
Description:	ribosomal protein L29 [Source:HGNC Symbol;Acc:10331]
Organism:	*Southern American pika (Ochotona princeps)*
Coordinates:	GeneScaffold_1344:100500..102454(-)

Parental gene:

RPL29, ENSOPRG00000008821