Parental gene:

ENSAMEG00000009163

Aliases:None
Description:None
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL192640.1:1278814..1280510(+)


>ENSAMEG00000009163
ATGGCCAAGTCCAAGAACCACACTACGCACAACCAGTCACGAAAATGGCACAGAAATGGCATCAAGAAACCCCGGTCACA
AAGATACGAATCTCTTAAGGGGGTAGACCCCAAGTTCCTGAGGAACATGCGCTTTGCCAAGAAGCACAACAAGAAGGGCC
TGAAAAAGATGCAGGCCAACAACGCCAAGGCCATGAGTGCACGTGCCGAGGCTATCAAGGCCCTCGTCAAGCCCAAGGAG
GTCACGCCCAAGATCCCAAAGGGCGGCAGCCGCAAGCTCAATCGACTTGCCTACATCGCTCACCCCAAGCTTGGGAAACG
TGCTCGTGCCCGCATTGCTAAGGGTCTCAGGCTCTGTGGCCGAAGTCCAAGGCCAAGGGTCAAACCAAGGCCAGGCCAGT
CTGCGACTCCGGCTCCGGCTCGTGCNCCGGCTCCCACTGCAGCTCAGGCTCCCAAAGGTGCCCAGGCCCCCGCAAAGTTG
GCCTGT

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000018628 ortholog_one2many 1 retrogene
Callithrix jacchus ENSCJAG00000005951 possible_ortholog 9 retrogenes
Cavia porcellus ENSCPOG00000011738 possible_ortholog 1 retrogene
Dasypus novemcinctus ENSDNOG00000000209 possible_ortholog 7 retrogenes
Equus caballus ENSECAG00000007397 possible_ortholog 2 retrogenes
Felis catus ENSFCAG00000001762 possible_ortholog 9 retrogenes
Homo sapiens ENSG00000162244 possible_ortholog 23 retrogenes
Gorilla gorilla ENSGGOG00000024691 possible_ortholog 16 retrogenes
Loxodonta africana ENSLAFG00000005757 possible_ortholog 5 retrogenes
Microcebus murinus ENSMICG00000002705 possible_ortholog 9 retrogenes
Myotis lucifugus ENSMLUG00000015088 ortholog_many2many 14 retrogenes
Macaca mulatta ENSMMUG00000019248 possible_ortholog 2 retrogenes
Monodelphis domestica ENSMODG00000028750 ortholog_many2many 17 retrogenes
Mustela putorius furo ENSMPUG00000011734 possible_ortholog 6 retrogenes
Mus musculus ENSMUSG00000048758 possible_ortholog 3 retrogenes
Otolemur garnettii ENSOGAG00000013766 possible_ortholog 2 retrogenes
Ochotona princeps ENSOPRG00000008821 possible_ortholog 10 retrogenes
Procavia capensis ENSPCAG00000009712 possible_ortholog 4 retrogenes
Pongo abelii ENSPPYG00000013818 possible_ortholog 21 retrogenes
Rattus norvegicus ENSRNOG00000011138 possible_ortholog 15 retrogenes
Sorex araneus ENSSARG00000013572 possible_ortholog 8 retrogenes
Sarcophilus harrisii ENSSHAG00000006854 ortholog_one2many 2 retrogenes
Sus scrofa ENSSSCG00000027573 ortholog_one2many 7 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000020488 possible_ortholog 14 retrogenes
Tursiops truncatus ENSTTRG00000003514 ortholog_one2many 5 retrogenes
Vicugna pacos ENSVPAG00000001282 ortholog_one2many 29 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_345 57.32 98.77
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2. retro_amel_379 64.18 80.86
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3. retro_amel_686 62.41 80.86
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4. retro_amel_913 68.99 95.06
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5. retro_amel_1373 63.97 82.10
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6. retro_amel_1740 97.73 54.32
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Download FASTA sequences of all ENSAMEG00000009163 retrocopies