RetrogeneDB ID: | retro_itri_1482 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393505.1:1042837..1043224(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000020488 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 93.8 % |
Parental protein coverage: | 77.71 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKMQANNAKAMSARAE |
MAKSKNHTTHNQSRKWHRNGIKKP.SQRYESLKG.D.KFLRNMRFAKK.NKKGLKKMQANNAKA.SARAE | |
Retrocopy | MAKSKNHTTHNQSRKWHRNGIKKP*SQRYESLKGIDTKFLRNMRFAKKYNKKGLKKMQANNAKALSARAE |
Parental | AIKALAKPKEVKPKMPKGASRKLDRLALLAHPKHAKRARAHMARERRLSRPKAKAQAKT |
AIKALAKPKEVKPKMPKGAS.KLDRLALLAHPKH.KRA.AHMARERRLSRPKAKAQAKT | |
Retrocopy | AIKALAKPKEVKPKMPKGASCKLDRLALLAHPKHTKRALAHMARERRLSRPKAKAQAKT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |