RetrogeneDB ID: | retro_itri_1667 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393620.1:306354..306642(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000020488 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 72.92 % |
Parental protein coverage: | 57.83 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKMQANNAKAMSARAE |
..KSKNHT.H..S.KWHRNGIKK..SQRYESLK.VDPKFLRNM.FAK.HNKKG.KKMQANN.K.MSA.AE | |
Retrocopy | IVKSKNHTMHK*SPKWHRNGIKKLQSQRYESLKRVDPKFLRNMCFAKNHNKKGQKKMQANNTKGMSALAE |
Parental | AIKALAKPKEVKPKMPKGASRKLDRL |
AIK.L.KPKEVK.K.......KLD.L | |
Retrocopy | AIKGLVKPKEVKLKSIGCQLQKLDCL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |