RetrogeneDB ID: | retro_amel_1579 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193644.1:483502..483846(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS20 | ||
Ensembl ID: | ENSAMEG00000006087 | ||
Aliases: | None | ||
Description: | ribosomal protein S20 [Source:HGNC Symbol;Acc:10405] |
Percent Identity: | 76.27 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRG-AKEKNLKVKGPVRMPTKTLRITTRKTPC |
AFKDTG.TP.EPEV.IHRI.IT..S..VKSLEK.C..L.RG.A.EKNL.VKGPV.MPTKTLRIT.RKTP. | |
Retrocopy | AFKDTGRTPEEPEV-IHRIKITPASSKVKSLEKECPNLMRG<AREKNLQVKGPVQMPTKTLRIT-RKTPR |
Parental | GEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIETGVEVEVTIAD |
GEGSKTW..F..RIHKR.IDLHSPSEI.KQITS.SIE.GVEVEVT..D | |
Retrocopy | GEGSKTWYCFHVRIHKRRIDLHSPSEIGKQITSFSIEPGVEVEVTTID |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |