RetrogeneDB ID: | retro_amel_1619 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193755.1:94434..94659(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS20 | ||
Ensembl ID: | ENSAMEG00000006087 | ||
Aliases: | None | ||
Description: | ribosomal protein S20 [Source:HGNC Symbol;Acc:10405] |
Percent Identity: | 74.03 % |
Parental protein coverage: | 64.1 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | AFKDTGKTP-VEPEVAIHRIRITLT-SRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTP |
AFK.TGKTP...PEVAIH..RITL..S.N.KS.E.VCA.LIRG.KEKN.KVK.PVR.PTK.LRITTRK.P | |
Retrocopy | AFKGTGKTP<LKPEVAIHQFRITLS>SCNLKS*ETVCA*LIRGTKEKNFKVKAPVRIPTKILRITTRKIP |
Parental | CGEGSKT |
CG.GSKT | |
Retrocopy | CG*GSKT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |