RetrogeneDB ID: | retro_lafr_851 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_40:10294893..10295236(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS20 | ||
Ensembl ID: | ENSLAFG00000002515 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.48 % |
Parental protein coverage: | 95.8 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPT-KTLRITTRKTPC |
AF.DT.KTP.EPEVAIH.IRITLTS.NVKSLEKVCADLIRG.KEKNLKVKG.VRMPT.KTLRITTRKTPC | |
Retrocopy | AFMDTRKTPEEPEVAIHQIRITLTSFNVKSLEKVCADLIRGSKEKNLKVKGLVRMPT>KTLRITTRKTPC |
Parental | GEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVT |
.EGSKTW..FQMR.HKRLI.L..PSE.V.QITSISIE.GVE.EVT | |
Retrocopy | DEGSKTWNHFQMRTHKRLISLIGPSETVEQITSISIESGVEAEVT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |