RetrogeneDB ID: | retro_amel_599 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192519.1:854933..855184(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS20 | ||
Ensembl ID: | ENSAMEG00000006087 | ||
Aliases: | None | ||
Description: | ribosomal protein S20 [Source:HGNC Symbol;Acc:10405] |
Percent Identity: | 79.78 % |
Parental protein coverage: | 72.65 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | AFKDTGKTPV-EPEVAIHRIRITLTS-RNVKSLEKVCA-DLIRGAKEKNLK-VKGPVRMPTKTLRITTRK |
AFKDT.KTP..EPEVAIH.IRITLTS..NVKSLEKVC..DL.RG.KEKNLK.V.GPV.MP..TLRITTRK | |
Retrocopy | AFKDTKKTPM<EPEVAIHQIRITLTS<HNVKSLEKVCE<DLMRGTKEKNLK<VEGPVWMPATTLRITTRK |
Parental | TPCGEGSKTWDRFQMRIHK |
TPC.EGS..WDRFQMRIHK | |
Retrocopy | TPCSEGSNIWDRFQMRIHK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |