RetrogeneDB ID: | retro_amel_437 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192442.1:414215..414509(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS20 | ||
Ensembl ID: | ENSAMEG00000006087 | ||
Aliases: | None | ||
Description: | ribosomal protein S20 [Source:HGNC Symbol;Acc:10405] |
Percent Identity: | 73.74 % |
Parental protein coverage: | 84.62 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | IRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLI |
I...L.S.N...LEKVCADLIRG.KEKNL.VKGPV.MPTKTLRITTRKT.....SK.WD.FQMRI.K.LI | |
Retrocopy | IPLELISHNLRYLEKVCADLIRGSKEKNLRVKGPVLMPTKTLRITTRKTSLW-CSKIWDCFQMRIYK*LI |
Parental | DLHSPSEIVKQITSISIETGVEVEVTIAD |
DLHS..EIVK.IT.ISIE.GV.VEVTIAD | |
Retrocopy | DLHSLCEIVKHITFISIEPGVNVEVTIAD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |