RetrogeneDB ID: | retro_amel_1914 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL195780.1:16695..17320(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000014708 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 76.78 % |
Parental protein coverage: | 98.12 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MAAPAVSG-LSRQVRCFSTSVVRPFSKLVRPPVQVYGIEGCYATALYSAASKQNKLEQVEKELLR-VAQI |
MA.PAV.G.LS.QV.CFSTSVVR.F.K..RPPVQVYGIEGCYATALYSAASK.NKLEQVEKELL....QI | |
Retrocopy | MATPAVPG<LSQQVCCFSTSVVRLFAKHMRPPVQVYGIEGCYATALYSAASKHNKLEQVEKELLN<LSQI |
Parental | LKEPKMAASIMNPYIKRSVKVKSLNDMSAKERFSPLTSNLINLLAENGRLDNTPGVISAFSTIMSVHRGE |
LKEPKMAASIMNP..K..VKVK.LNDM.AKE.FSPL.S.LI...AENG.L.N.PGVISAFS..MS.H.GE | |
Retrocopy | LKEPKMAASIMNPCVKYTVKVKRLNDMTAKEKFSPLISSLIS*FAENGCLNNIPGVISAFSMVMSIHCGE |
Parental | VPCTVTTASPLDEATLTELKTVLKSFLSKGQVLKLEVKTDPSIMGGMIVRIGERYADMSAKTKIQKLSRA |
VPCTVTTASPLDEA.L.ELKT.LKSFL..GQV.KLEVK.D.S.MG.MIVR.GE.YADMS.KTKIQKLS.. | |
Retrocopy | VPCTVTTASPLDEAILSELKTILKSFLGQGQVSKLEVKIDLSSMGAMIVRTGEKYADMSVKTKIQKLSTG |
Parental | M |
. | |
Retrocopy | L |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |