RetrogeneDB ID: | retro_etel_841 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_173584:2658..3199(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000000807 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.49 % |
Parental protein coverage: | 86.79 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | PPVQIHGVEGRYATALYSAASKQ-NKLEQVEKELLRVAQLLKDPKVALAILNPHVKRSIKVKSLSDITAK |
PPVQIHG..G.YATALYSAASK..NKL.Q....LLRVAQLLKD.KVALAILN.HVK.SIKVK.L.DIT.K | |
Retrocopy | PPVQIHGAVGCYATALYSAASKN>NKLYQLQSKLLRVAQLLKDLKVALAILNCHVKHSIKVKILNDITGK |
Parental | ERLSPITTNLINLLAENGRLNNAPGVISAFSTIMSVHRGEVPCTVTTASSLDNTSLSELKTVLNSFLSQG |
E..S.I..NLIN.LAEN..LNN.PGV...FST.M..HRGEV..TVTTAS.LD..SL......LN....Q. | |
Retrocopy | ESFSSIISNLINMLAENDHLNNTPGVM*VFSTLMNMHRGEVH*TVTTASPLDIASL*IENSFLN----QD |
Parental | QVLKLEVKTDPSIMGGMIVRIGEKYVDMSAKSKIQKLSRIIRETV |
.V.KLE.K.DP.I.GGMIV....KY.DMSAKSKIQK.SR..RE.V | |
Retrocopy | HVFKLEFKSDPAIIGGMIVHMRGKYMDMSAKSKIQKWSRVMREMV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |