RetrogeneDB ID: | retro_itri_794 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393323.1:11412854..11413207(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000008658 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 80.83 % |
Parental protein coverage: | 58.91 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | ITAKERFSPITSNLINLLAENGRLGSAHGIISAFSTIMSVHRGEVPCTVTTASPLPEAVLSE-LKTVLKS |
.TAKERFSP..SNLINLLAEN..L..A..IISAFSTIMSV.RGEVPCTV.T.SPL.EA..SE..KTVLKS | |
Retrocopy | MTAKERFSP-KSNLINLLAENCFLDNALNIISAFSTIMSVNRGEVPCTVITSSPLHEASPSE<VKTVLKS |
Parental | FLSQGQVLKLEVKTDPAIMGGMIVRIGEKYVDMSAKTKIQKLTRAMRESI |
FLSQGQVLKL.VKTDPAIMGGMI..IGEKYVDMSAKTKIQKL..AM.ESI | |
Retrocopy | FLSQGQVLKLDVKTDPAIMGGMIICIGEKYVDMSAKTKIQKLSWAMWESI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |