RetrogeneDB ID: | retro_mputfur_1628 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897426.1:70646..71283(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Atp5o | ||
Ensembl ID: | ENSMPUG00000001319 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit [Source:MGI Symbol;Acc:MGI:106341] |
Percent Identity: | 76.85 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | MAVPAVSGLSRQVRCFSTTVVRPFSKLVRPPVQVYGIEGRYATALYSAASKQNKL-EQVEKELLRVAQIL |
M.VPA.SGL..QVRCFSTTV.RPFSKL..PPVQVY.IEG..ATALYSAASK.NKL...VE.ELLRVAQ.L | |
Retrocopy | MTVPAESGLCQQVRCFSTTVIRPFSKLMWPPVQVYDIEGHCATALYSAASKPNKL<VMVEEELLRVAQLL |
Parental | KEPKMAASIMNPYIKRSVKVKSLNDMSAKERFSPLTSNLINLLAENGRLDNTPGVISAFSTMMSVHR-GE |
KE.KMAASIMNPYIKRSVKVKSLNDMS.K.RFSPLTSNLIN.LAENG.LD.T.GVISAF..MMS.H..G. | |
Retrocopy | KESKMAASIMNPYIKRSVKVKSLNDMSTKDRFSPLTSNLINVLAENGCLDKTLGVISAFLNMMSIHL>GK |
Parental | VPCTVTTASPLDEATLTELKTVLKSFLSKGQVLKLEVKTDPSIMGGMIVRIGEKYADMSA-KTKIQKLSR |
V.CTVTT.SPL.EATL..LK.VLKSFLSKGQVLKLEVKT..SI.G.MI...GE.Y..MS..KTKIQKL.. | |
Retrocopy | VLCTVTTTSPL-EATLI*LKMVLKSFLSKGQVLKLEVKTNLSITGRMIIPTGERYTEMSV>KTKIQKLNS |
Parental | AMREVF |
AM.EVF | |
Retrocopy | AMWEVF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |