RetrogeneDB ID: | retro_etel_1002 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_19922:1539..1814(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSETEG00000014352 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 90.32 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWT |
MAK.TKKVGIVGKYGT.YGASLRKMVKKIEISQHA..TCSFCGKTKMKR.AVGIWHCGSCMKT.AGGAWT | |
Retrocopy | MAKHTKKVGIVGKYGTHYGASLRKMVKKIEISQHAQFTCSFCGKTKMKRCAVGIWHCGSCMKTAAGGAWT |
Parental | YNTTSAVTVKSA-IRRLKELKDQ |
YNTTSAVTVKSA.IRR.K.LKDQ | |
Retrocopy | YNTTSAVTVKSA<IRRRKGLKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |