RetrogeneDB ID: | retro_etel_307 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_5047:41689..41963(-) | ||
Located in intron of: | ENSETEG00000009325 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSETEG00000014352 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 91.49 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MAKRTKKVGIVGKYGT-RYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGI-WHCGSCMKTVAGGA |
MAKRTKKVGI.GKYGT.RYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGI...CGSCMKT.AGGA | |
Retrocopy | MAKRTKKVGIMGKYGT<RYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGI<LRCGSCMKTGAGGA |
Parental | WTYNTTSAVTVKSAIRRLKELKDQ |
WTYNTTSAV.VK.AIRRLKELKDQ | |
Retrocopy | WTYNTTSAVPVKFAIRRLKELKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |