RetrogeneDB ID: | retro_etel_907 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_183137:6778..7044(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSETEG00000014352 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 73.96 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | MAKRTKKVGIVGKYGT-RYGASLRKMVKKIEISQHAKYTCSFCGKTKMK-RRAVGIWHCGSCMKTV-AGG |
MAKRTKKVGIVGK.GT.RYGASLR.MVKK.EIS.HAK.T.S.CG.TKM..RRAVGIW.C..C.KTV.... | |
Retrocopy | MAKRTKKVGIVGKHGT<RYGASLRNMVKKSEISRHAKHTGSSCGRTKMR<RRAVGIWPC--CVKTV<XXX |
Parental | AWTYNT-TSAVTVKSAIRRLKELKDQ |
.WTY.T..SAV.VKSA.RRLKELKDQ | |
Retrocopy | XWTYST<PSAVPVKSAVRRLKELKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |