RetrogeneDB ID: | retro_etel_1038 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_203009:3473..3746(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSETEG00000014352 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 75.79 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCS-FCGKTKMKRR-AVGI-WHCGSCMKTVAGG |
MAKRTKKVGIVGKYGTRY.ASL.KMVKK.EISQHA.YTCS..CG.T.M.RR.A.GI...CG.C.KT.AGG | |
Retrocopy | MAKRTKKVGIVGKYGTRYRASLKKMVKKTEISQHATYTCS<LCGRTRMRRR<AMGI<LRCGACVKTAAGG |
Parental | AWTYNTTSAVTVKSAIRRLKELKDQ |
AWTYNTTSAV.VKSA..R.K.LK.Q | |
Retrocopy | AWTYNTTSAVPVKSAVTRRKGLKGQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |