RetrogeneDB ID: | retro_etel_305 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_5007:10377..10636(+) | ||
Located in intron of: | ENSETEG00000009486 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSETEG00000014352 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 76.34 % |
Parental protein coverage: | 98.91 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | AKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAW-T |
.K..K...IVGKYGTR.GASLRKMVKKIEISQHAKYTC....KTKMKRR..GI.HCGSCM.TVAGGA..T | |
Retrocopy | SKTAKRTKIVGKYGTRSGASLRKMVKKIEISQHAKYTC----KTKMKRRTGGICHCGSCMRTVAGGAG<T |
Parental | YNT-TSAVTVKSAIRRLKELKDQ |
YNT..SAVTV.SAIRRL.ELK.Q | |
Retrocopy | YNT<PSAVTVESAIRRLQELKEQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |