RetrogeneDB ID: | retro_etel_164 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_2796:123214..123489(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSETEG00000014352 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 73.12 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWT |
MAK.TKKVG.VGK.GTR.GASLR..VKKIEISQHAKY..SF.GKT.MKRRA..IW..G.CMKT..GGAWT | |
Retrocopy | MAKGTKKVGLVGK*GTRDGASLREKVKKIEISQHAKYAGSFRGKTNMKRRAGDIWCGGPCMKTGVGGAWT |
Parental | YNT-TSAVTVKSAIRRLKELKDQ |
Y.T..SAV..KSA.RRLK.L.DQ | |
Retrocopy | YST<SSAVPGKSAARRLKGLTDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |