RetrogeneDB ID: | retro_meug_1562 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold45534:20736..21077(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS25 | ||
Ensembl ID: | ENSMEUG00000014185 | ||
Aliases: | None | ||
Description: | ribosomal protein S25 [Source:HGNC Symbol;Acc:10413] |
Percent Identity: | 51.26 % |
Parental protein coverage: | 93.55 % |
Number of stop codons detected: | 5 |
Number of frameshifts detected | 3 |
Parental | KDDK-KKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCKEVPNYKLITPAV |
KDD..KKK.A....K.DK....K.....K..K..KGKV.DK.N.LVLFD....DK..KEVPN..LIT... | |
Retrocopy | KDDN>KKKEASMLSKRDKNLMYKF--ESKSEK*TKGKV*DKVNKLVLFDATIFDKV*KEVPNSILITFTA |
Parental | VSERLKI-RGSLARAALQELLSKGLIKLVS-KHRAQVIYTRNTKGGDAP |
.SER.KI..GS....AL..LL.K.LIKL....HR.QVI.TR....GD.P | |
Retrocopy | ISER*KI<LGSQPCTAL*CLLGKSLIKLIC<QHRTQVISTRKSNDGDVP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |