RetrogeneDB ID: | retro_mmur_1223 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_34035:7323..7892(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRPS1 | ||
Ensembl ID: | ENSMICG00000001929 | ||
Aliases: | None | ||
Description: | phosphoribosyl pyrophosphate synthetase 1 [Source:HGNC Symbol;Acc:9462] |
Percent Identity: | 71.2 % |
Parental protein coverage: | 59.75 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEINDNLMEL |
MPNIKIFSGSS.QDLSQKIAD.LGLELG.VVTKKF.N.ETCVEIG.SV.GEDVY.VQSGCG.I.DNLMEL | |
Retrocopy | MPNIKIFSGSSNQDLSQKIADCLGLELG*VVTKKFCNKETCVEIGRSVHGEDVYVVQSGCGKISDNLMEL |
Parental | LIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANM-LSVAGADHIITMDLHASQIQXXXD |
LIM...CK..SASRVTAVI.CF.YA.QDK..KS.AP.S.KL..NM.....GA.H.ITMDL..SQ.....D | |
Retrocopy | LIMTTICKLVSASRVTAVIACFLYAQQDKMNKSWAPSSYKLITNM<ATTEGAKHVITMDLCTSQTHIFFD |
Parental | IPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFA |
IPVDN.YA.P.VLKWIR.NI.EW.NCTI.S.D...A..VTSIA..L.VDFA | |
Retrocopy | IPVDNVYAKPVVLKWIR*NIFEWKNCTIASLDTAEANSVTSIAEQLIVDFA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |