RetrogeneDB ID: | retro_mmur_1422 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_5689:53837..54372(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRPS1 | ||
Ensembl ID: | ENSMICG00000001929 | ||
Aliases: | None | ||
Description: | phosphoribosyl pyrophosphate synthetase 1 [Source:HGNC Symbol;Acc:9462] |
Percent Identity: | 51.83 % |
Parental protein coverage: | 57.55 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 7 |
Parental | MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSN-QETCVEIGESV-RGEDVYIVQSGCGEIND-NL |
.PNI..FSG.S..DLSQKIA..L.LELGK..T..FSN..E.C.EI.E.V.R.ED.YIV.SGCG.I...N. | |
Retrocopy | IPNIQTFSGNSYLDLSQKIAYYLCLELGKMFTQNFSN<WEICMEISENVHREEDIYIV*SGCGKISA<NI |
Parental | MELLIMINACKIASASRV-TAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG-ADHIITM-DLHASQI |
.E.L.MI.A.KIA....V.T.....FP.A.Q.KK..S.API..K..A.ML..AG..DHII.M.D.H.S.I | |
Retrocopy | LE-LVMIHAYKIAADNWV>TVFVSHFP*ACQNKKNNSQAPILTKIAADMLCTAG<PDHIIPM<DIH-SKI |
Parental | Q-XXXDIPVDNLY-AEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIAD |
Q....DIP...L....PA..KW...NISE.RN....SP.A.G..R..S..D | |
Retrocopy | Q<GLVDIPTHSLH<LKPAGIKWMKNNISEQRN--YFSPAAQGTDRTMSSED |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |