RetrogeneDB ID: | retro_nleu_217 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397261.1:40608848..40609802(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSNLEG00000019302 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRPS1 | ||
Ensembl ID: | ENSNLEG00000013911 | ||
Aliases: | None | ||
Description: | Ribose-phosphate pyrophosphokinase [Source:UniProtKB/TrEMBL;Acc:G1RUI9] |
Percent Identity: | 94.97 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEINDNLMEL |
MPNIKIFSGSSHQDLSQKIA..LGLELGKVVTKKFSNQETCVEI.ESVRGEDVYIVQSGCGEIN..LMEL | |
Retrocopy | MPNIKIFSGSSHQDLSQKIANHLGLELGKVVTKKFSNQETCVEIDESVRGEDVYIVQSGCGEINNGLMEL |
Parental | LIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDI |
LIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLS.AGADHIITMDLHASQIQGFFDI | |
Retrocopy | LIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSIAGADHIITMDLHASQIQGFFDI |
Parental | PVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKERKKANEVDRMVLVGD |
PVDNLYAEP.VLKWIRENISEW.NCTIVSPDAGGAKRVTSIAD.LNVDFALIHKERKKANEVD.MVLVGD | |
Retrocopy | PVDNLYAEPTVLKWIRENISEWKNCTIVSPDAGGAKRVTSIADQLNVDFALIHKERKKANEVDCMVLVGD |
Parental | VKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDK |
V.DRVAILVDDMADTCGTIC.AADKLLSAGATRVYAILTHGIFSGPAIS.IN.ACFEAVVVTNTIPQ.DK | |
Retrocopy | VNDRVAILVDDMADTCGTICLAADKLLSAGATRVYAILTHGIFSGPAISCINTACFEAVVVTNTIPQDDK |
Parental | MKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL |
MKHCSKI.VIDISMILAEAIRRTHNGESVSYLFSHVPL | |
Retrocopy | MKHCSKIRVIDISMILAEAIRRTHNGESVSYLFSHVPL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |