RetrogeneDB ID: | retro_nleu_2868 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397457.1:650788..651286(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAE | ||
Ensembl ID: | ENSNLEG00000000656 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 92.17 % |
Parental protein coverage: | 59.07 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | VIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFY |
VIGARRASWRIISSIEQKEENKGGEDKLKMI.EY.QM.ETELKL.CCDILDVLDK.LIPAANTGESKVFY | |
Retrocopy | VIGARRASWRIISSIEQKEENKGGEDKLKMIWEYQQMIETELKLLCCDILDVLDKNLIPAANTGESKVFY |
Parental | YKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRA |
YKMKGDYHRYLAEFATGNDR.EA.ENSLVAYKAASD.AMTELPPTHPI.LGLALNFSVFYYEILNSPDRA | |
Retrocopy | YKMKGDYHRYLAEFATGNDRQEAVENSLVAYKAASDTAMTELPPTHPIHLGLALNFSVFYYEILNSPDRA |
Parental | CRLAKAAFDDAIAELDTLSEESYKDS |
CRLAKAAFD..IAELDTLSEES.KD. | |
Retrocopy | CRLAKAAFDYTIAELDTLSEESCKDT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000005664 | 3 retrocopies | |
Choloepus hoffmanni | ENSCHOG00000010861 | 2 retrocopies | |
Ciona intestinalis | ENSCING00000023856 | 1 retrocopy | |
Ciona savignyi | ENSCSAVG00000011723 | 2 retrocopies | |
Echinops telfairi | ENSETEG00000012056 | 2 retrocopies | |
Homo sapiens | ENSG00000108953 | 4 retrocopies | |
Gorilla gorilla | ENSGGOG00000016840 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000010174 | 2 retrocopies | |
Nomascus leucogenys | ENSNLEG00000000656 | 2 retrocopies |
retro_nleu_2067, retro_nleu_2868 ,
|
Nomascus leucogenys | ENSNLEG00000003220 | 7 retrocopies | |
Nomascus leucogenys | ENSNLEG00000006643 | 2 retrocopies | |
Nomascus leucogenys | ENSNLEG00000013534 | 3 retrocopies | |
Otolemur garnettii | ENSOGAG00000006155 | 2 retrocopies | |
Pongo abelii | ENSPPYG00000007769 | 4 retrocopies | |
Pan troglodytes | ENSPTRG00000008521 | 5 retrocopies | |
Ictidomys tridecemlineatus | ENSSTOG00000005084 | 1 retrocopy | |
Vicugna pacos | ENSVPAG00000010288 | 3 retrocopies |