Parental gene:

YWHAE, ENSMODG00000010174

Aliases:None
Description:tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:HGNC Symbol;Acc:12851]
Organism:Opossum (Monodelphis domestica)
Coordinates:2:516765139..516803086(-)


>ENSMODG00000010174
ATGGACGATCGGGAGGATCTGGTGTACCAGGCGAAATTGGCCGAGCAGGCCGAGCGATACGACGAAATGGTGGAATCAAT
GAAGAAGGTAGCGGGAATGGATGTGGAGTTGACAGTTGAAGAAAGAAACCTGCTGTCAGTTGCATATAATGTGATCGGAG
CCAGAAGAGCATCCTGGCGGATAATCAGCAGCATTGAACAGAAAGAAGAAAACGGAGGAGAGACAACTAAAATGATTCGG
GANTCATTTTGGAATTTGGGGACCTCTGGAACCCGGTTGGGGGTGGTTGAGACTGAACTAAAATTAATCTGTTGTGACAT
TCTGGACGTACTGGACAAACACCTCATTCCAGCAGCAAACACTGGCGAGTCCAAGGTTTTCTATTATAAAATGAAAGGGG
ACTACCACAGGTATCTGGCTGAATTTGCCACAGGAAATGACAGGAAGGAGGCTGCAGAGAATAGCCTGGTGGCTTATAAA
GCTGCTAGTGATATTGCAATGACAGAACTTCCGCCAACGCACCCCATCCGCTTAGGTCTTGCTCTCAACTTTTCCGTATT
CTACTATGAAATTCTTAATTCCCCTGACCGTGCCTGCAGGTTGGCAAAAGCAGCTTTTGATGATGCAATTGCAGAACTGG
ATACGCTGAGTGAAGAAAGCTATAAGGACTCGACACTTATCATGCAGTTGTTACGTGATAACCTGACACTATGGACTTCA
GATATGCAGGGTGATGGTGAAGAACAGAATAAAGAAGCGCTGCAGGATGTGGAAGATGAAAACCAGTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005664 ortholog_one2one 3 retrogenes
retro_btau_1485, retro_btau_372, retro_btau_954,
Choloepus hoffmanni ENSCHOG00000010861 ortholog_one2one 2 retrogenes
retro_chof_1912, retro_chof_905,
Ciona intestinalis ENSCING00000023856 ortholog_one2many 1 retrogene
retro_cint_15,
Ciona savignyi ENSCSAVG00000011723 ortholog_one2one 2 retrogenes
retro_csav_13, retro_csav_9,
Echinops telfairi ENSETEG00000012056 ortholog_one2one 2 retrogenes
retro_etel_1762, retro_etel_738,
Homo sapiens ENSG00000108953 ortholog_one2one 4 retrogenes
retro_hsap_2324, retro_hsap_3739, retro_hsap_3851, retro_hsap_4703,
Gorilla gorilla ENSGGOG00000016840 ortholog_one2one 1 retrogene
retro_ggor_2596,
Monodelphis domestica ENSMODG00000006158 other_paralog 8 retrogenes
retro_mdom_1589, retro_mdom_1664, retro_mdom_1763, retro_mdom_1815, retro_mdom_1875, retro_mdom_1958, retro_mdom_255, retro_mdom_446,
Monodelphis domestica ENSMODG00000014740 other_paralog 1 retrogene
retro_mdom_1339,
Monodelphis domestica ENSMODG00000016200 other_paralog 2 retrogenes
retro_mdom_1557, retro_mdom_212,
Nomascus leucogenys ENSNLEG00000000656 ortholog_one2one 2 retrogenes
retro_nleu_2067, retro_nleu_2868,
Otolemur garnettii ENSOGAG00000006155 ortholog_one2one 2 retrogenes
retro_ogar_1003, retro_ogar_2144,
Pongo abelii ENSPPYG00000007769 ortholog_one2one 4 retrogenes
retro_pabe_1644, retro_pabe_1646, retro_pabe_2107, retro_pabe_3219,
Pan troglodytes ENSPTRG00000008521 ortholog_one2one 5 retrogenes
retro_ptro_1697, retro_ptro_2538, retro_ptro_2624, retro_ptro_2626, retro_ptro_2993,
Ictidomys tridecemlineatus ENSSTOG00000005084 ortholog_one2one 1 retrogene
retro_itri_1175,
Vicugna pacos ENSVPAG00000010288 ortholog_one2one 3 retrogenes
retro_vpac_230, retro_vpac_411, retro_vpac_559,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_744 75.54 53.05
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2. retro_mdom_1567 77.70 53.05
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Download FASTA sequences of all ENSMODG00000010174 retrocopies