Parental gene:

YWHAE, ENSG00000108953

Aliases:YWHAE, 14-3-3E, HEL2, KCIP-1, MDCR, MDS
Description:tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:HGNC Symbol;Acc:12851]
Organism:Human (Homo sapiens)
Coordinates:17:1247565..1303672(-)


>ENSG00000108953
ATGGATGATCGAGAGGATCTGGTGTACCAGGCGAAGCTGGCCGAGCAGGCTGAGCGATACGACGAAATGGTGGAGTCAAT
GAAGAAAGTAGCAGGGATGGATGTGGAGCTGACAGTTGAAGAAAGAAACCTCCTATCTGTTGCATATAAGAATGTGATTG
GAGCTAGAAGAGCCTCCTGGAGAATAATCAGCAGCATTGAACAGAAAGAAGAAAACAAGGGAGGAGAAGACAAGCTAAAA
ATGATTCGGGAATATCGGCAAATGGTTGAGACTGAGCTAAAGTTAATCTGTTGTGACATTCTGGATGTACTGGACAAACA
CCTCATTCCAGCAGCTAACACTGGCGAGTCCAAGGTTTTCTATTATAAAATGAAAGGGGACTACCACAGGTATCTGGCAG
AATTTGCCACAGGAAACGACAGGAAGGAGGCTGCGGAGAACAGCCTAGTGGCTTATAAAGCTGCTAGTGATATTGCAATG
ACAGAACTTCCACCAACGCATCCTATTCGCTTAGGTCTTGCTCTCAATTTTTCCGTATTCTACTACGAAATTCTTAATTC
CCCTGACCGTGCCTGCAGGTTGGCAAAAGCAGCTTTTGATGATGCAATTGCAGAACTGGATACGCTGAGTGAAGAAAGCT
ATAAGGACTCTACACTTATCATGCAGTTGTTACGTGATAATCTGACACTATGGACTTCAGACATGCAGGGTGACGGTGAA
GAGCAGAATAAAGAAGCGCTGCAGGACGTGGAAGACGAAAATCAGTGA

Library Parental gene expression (RPM)
bodymap2_adipose 615 .74 RPM
bodymap2_adrenal 358 .22 RPM
bodymap2_brain 1163 .31 RPM
bodymap2_breast 549 .75 RPM
bodymap2_colon 539 .33 RPM
bodymap2_heart 382 .07 RPM
bodymap2_kidney 453 .17 RPM
bodymap2_liver 239 .27 RPM
bodymap2_lung 630 .29 RPM
bodymap2_lymph_node 299 .72 RPM
bodymap2_ovary 588 .39 RPM
bodymap2_prostate 407 .30 RPM
bodymap2_skeletal_muscle 732 .42 RPM
bodymap2_testis 661 .44 RPM
bodymap2_thyroid 749 .48 RPM
bodymap2_white_blood_cells 221 .94 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005664 ortholog_one2one 3 retrogenes
retro_btau_1485, retro_btau_372, retro_btau_954,
Choloepus hoffmanni ENSCHOG00000010861 ortholog_one2one 2 retrogenes
retro_chof_1912, retro_chof_905,
Ciona intestinalis ENSCING00000023856 ortholog_one2many 1 retrogene
retro_cint_15,
Ciona savignyi ENSCSAVG00000011723 ortholog_one2one 2 retrogenes
retro_csav_13, retro_csav_9,
Echinops telfairi ENSETEG00000012056 ortholog_one2one 2 retrogenes
retro_etel_1762, retro_etel_738,
Homo sapiens ENSG00000134308 other_paralog 2 retrogenes
retro_hsap_3004, retro_hsap_8,
Homo sapiens ENSG00000164924 other_paralog 1 retrogene
retro_hsap_549,
Homo sapiens ENSG00000166913 other_paralog 4 retrogenes
retro_hsap_4160, retro_hsap_4841, retro_hsap_622, retro_hsap_855,
Gorilla gorilla ENSGGOG00000016840 ortholog_one2one 1 retrogene
retro_ggor_2596,
Monodelphis domestica ENSMODG00000010174 ortholog_one2one 2 retrogenes
retro_mdom_1567, retro_mdom_744,
Nomascus leucogenys ENSNLEG00000000656 ortholog_one2one 2 retrogenes
retro_nleu_2067, retro_nleu_2868,
Otolemur garnettii ENSOGAG00000006155 ortholog_one2one 2 retrogenes
retro_ogar_1003, retro_ogar_2144,
Pongo abelii ENSPPYG00000007769 ortholog_one2one 4 retrogenes
retro_pabe_1644, retro_pabe_1646, retro_pabe_2107, retro_pabe_3219,
Pan troglodytes ENSPTRG00000008521 ortholog_one2one 5 retrogenes
retro_ptro_1697, retro_ptro_2538, retro_ptro_2624, retro_ptro_2626, retro_ptro_2993,
Ictidomys tridecemlineatus ENSSTOG00000005084 ortholog_one2one 1 retrogene
retro_itri_1175,
Vicugna pacos ENSVPAG00000010288 ortholog_one2one 3 retrogenes
retro_vpac_230, retro_vpac_411, retro_vpac_559,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2324 90.98 100.00
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2. retro_hsap_3739 90.45 77.65
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3. retro_hsap_3851 86.14 64.71
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4. retro_hsap_4703 54.60 63.53
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Download FASTA sequences of all ENSG00000108953 retrocopies