RetrogeneDB ID: | retro_opri_1170 | ||
Retrocopylocation | Organism: | Southern American pika (Ochotona princeps) | |
Coordinates: | scaffold_8487:39415..39685(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NUTF2 | ||
Ensembl ID: | ENSOPRG00000013727 | ||
Aliases: | None | ||
Description: | nuclear transport factor 2 [Source:HGNC Symbol;Acc:13722] |
Percent Identity: | 77.78 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MGDKPIWEQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITA |
MG.KPI.EQIGSSFIQHYY.L.DN.RTQLGAI...AS.LTWEGQQ.QGKAA..EKLSSLP.Q.IQHSI.. | |
Retrocopy | MGEKPISEQIGSSFIQHYYHLLDNGRTQLGAILLAASYLTWEGQQLQGKAAVAEKLSSLPLQEIQHSILV |
Parental | QDHQPTPDSCIISMVVGQLK |
Q.H.P.PDSCI.SMVVGQLK | |
Retrocopy | QNHEPSPDSCIFSMVVGQLK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |