RetrogeneDB ID: | retro_chof_1619 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_34314:11270..11642(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NUTF2 | ||
Ensembl ID: | ENSCHOG00000003059 | ||
Aliases: | None | ||
Description: | nuclear transport factor 2 [Source:HGNC Symbol;Acc:13722] |
Percent Identity: | 63.57 % |
Parental protein coverage: | 99.21 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | MAESPIWEQVGASFVLLYYRHFDADRV-QLGALYIDASCLTW-EGQQFQGKAAIVEKLSSLPFQKIQHSI |
MA....WEQ...SF...YY..F...R..QL...YIDASC....EGQQFQGK.AI.EKL......KIQHSI | |
Retrocopy | MADKQFWEQTRSSFIQHYYQLFHNNRT<QLSVIYIDASCMGR<EGQQFQGKGAIGEKLCCVLLPKIQHSI |
Parental | TAQDHQPTPDSCIISMVVGQLKADEDPIMGF-HQMFLLKNINDAWVCTNDMFRLALHNF |
T.QDHQPTPD.CII.M.VGQLKA..DPI.GF..QMFLLKN.N.A.VCTNDM.R.A.HNF | |
Retrocopy | TVQDHQPTPDNCIIIMAVGQLKANKDPIVGF<PQMFLLKN-NNA*VCTNDMLRQAVHNF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |