RetrogeneDB ID: | retro_chof_1386 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_27814:10432..10807(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NUTF2 | ||
Ensembl ID: | ENSCHOG00000003059 | ||
Aliases: | None | ||
Description: | nuclear transport factor 2 [Source:HGNC Symbol;Acc:13722] |
Percent Identity: | 68.8 % |
Parental protein coverage: | 98.43 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | ESPIWEQVGASFVLLYYRHFDADRVQLGALYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQD |
..P.WEQ.G.SF....Y..FD..R.QLG...I..SCL..EGQQFQGKA.I.EK..SL.FQKIQHSI..QD | |
Retrocopy | DKPVWEQTGSSFIQHHYQLFDNNRTQLGSICIVTSCLICEGQQFQGKAVILEKFPSL*FQKIQHSIIVQD |
Parental | HQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRLALHNFG |
HQPTPDSCIIS.VV.QLKA.E.PIMGF.QMF..K.IN..WVCTNDMF.LALHNFG | |
Retrocopy | HQPTPDSCIISTVVSQLKANESPIMGFYQMFP*KKINNNWVCTNDMFKLALHNFG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |