RetrogeneDB ID: | retro_pcap_49 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | GeneScaffold_2551:49130..49450(-) | ||
Located in intron of: | ENSPCAG00000003922 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL9 | ||
Ensembl ID: | ENSPCAG00000005834 | ||
Aliases: | None | ||
Description: | ribosomal protein L9 [Source:HGNC Symbol;Acc:10369] |
Percent Identity: | 90.74 % |
Parental protein coverage: | 55.21 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | GFRYKMRSVYAHFPINVVIQENGSLVEIRNF-LGEKY-IRRVRMRPGVACSVSQAQKDELILEGNDIELV |
GFRYKMRSVYAHFPINVVIQ.NG.LVEIRNF.LG.K..I.RVRMRPGVACSVSQAQKDELILEGNDIELV | |
Retrocopy | GFRYKMRSVYAHFPINVVIQDNGLLVEIRNF<LG*KNNIHRVRMRPGVACSVSQAQKDELILEGNDIELV |
Parental | SNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQADE |
SNSA.LIQQATTV.NKDIRKFLDGIYV.EKGTVQQADE | |
Retrocopy | SNSATLIQQATTVQNKDIRKFLDGIYVCEKGTVQQADE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |