RetrogeneDB ID: | retro_pcap_60 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | GeneScaffold_3302:84081..84393(-) | ||
Located in intron of: | ENSPCAG00000002820 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL9 | ||
Ensembl ID: | ENSPCAG00000005834 | ||
Aliases: | None | ||
Description: | ribosomal protein L9 [Source:HGNC Symbol;Acc:10369] |
Percent Identity: | 68.57 % |
Parental protein coverage: | 54.69 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | FRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNS |
F.YKM.SVYA.FPINVV.QEN.SLVE..NFLGEK.IRRV.MR.GVACS.S...K.ELILEGND.EL.S.S | |
Retrocopy | FHYKMSSVYANFPINVVTQENESLVET*NFLGEKCIRRV*MRLGVACSAS*PMK-ELILEGNDNELLSDS |
Parental | AALIQQATTVKNKDIRKFLDGIYVSEKGTVQQADE |
AA.I....T..NK.I..FL.GI..SEKGTV.Q.DE | |
Retrocopy | AAVIHHCATGENKAIQMFLAGICISEKGTVHQGDE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |