Parental gene: | ARPP19, ENSBTAG00000011022 |
| Aliases: | ARPP19, ARPP-16, ARPP-19 |
| Description: | cAMP-regulated phosphoprotein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q28055] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 10:57923245..57938671(+) |
>ENSBTAG00000011022
ATGTCTGCGGAAGTCCCCGAGGCAGCCTCCGCGGAGGAGCAGAAGGAAATGGAAGATAAAGTGACTAGTCCAGAGAAAGC
TGAAGAAGCAAAATTAAAAGCAAGGTATCCTCATCTGGGACAAAAGCCTGGAGGTTCCGATTTTTTAAGGAAACGATTGC
AGAAAGGGCAAAAATATTTTGATTCTGGGGATTACAACATGGCTAAAGCAAAAATGAAGAACAAGCAACTTCCTACTGCA
ACCCCGGATAAGACAGAGGTCACTGGTGACCACATTCCCACTCCACAGGACCTTCCTCAACGGAAACCATCTCTTGTTGC
TAGCAAACTGGCTGGCTGA
ATGTCTGCGGAAGTCCCCGAGGCAGCCTCCGCGGAGGAGCAGAAGGAAATGGAAGATAAAGTGACTAGTCCAGAGAAAGC
TGAAGAAGCAAAATTAAAAGCAAGGTATCCTCATCTGGGACAAAAGCCTGGAGGTTCCGATTTTTTAAGGAAACGATTGC
AGAAAGGGCAAAAATATTTTGATTCTGGGGATTACAACATGGCTAAAGCAAAAATGAAGAACAAGCAACTTCCTACTGCA
ACCCCGGATAAGACAGAGGTCACTGGTGACCACATTCCCACTCCACAGGACCTTCCTCAACGGAAACCATCTCTTGTTGC
TAGCAAACTGGCTGGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 122 .97 RPM |
| SRP017611_kidney | 48 .78 RPM |
| SRP017611_liver | 9 .74 RPM |
| ERP005899_muscle | 20 .22 RPM |
| ERP005899_liver | 23 .86 RPM |
| SRP030211_testis | 83 .42 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000032515 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000011228 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000004474 | ortholog_one2one | 9 retrogenes | |
| Dipodomys ordii | ENSDORG00000011321 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000015550 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000128989 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000025250 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000006551 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000015489 | ortholog_one2one | 10 retrogenes | |
| Otolemur garnettii | ENSOGAG00000013865 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000006487 | ortholog_one2many | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000042183 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000004618 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000003677 | ortholog_one2one | 7 retrogenes | |
| Tursiops truncatus | ENSTTRG00000004804 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_952 | 90.43 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_981 | 95.54 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_btau_1259 | 78.57 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_btau_1821 | 77.19 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_btau_1845 | 63.54 | 82.14 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000011022 retrocopies