Parental gene:

ARPP19, ENSDNOG00000004474

Aliases:None
Description:cAMP-regulated phosphoprotein, 19kDa [Source:HGNC Symbol;Acc:16967]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_2752:436379..452086(-)


>ENSDNOG00000004474
ATGTCCGCGGAAATCCCCGAGGCAGCCTCCGCGGAGGAGCAGAAGGAAATGGAAGATAAAGTGACTAGTCCAGAGAAAGC
TGAAGAAGCAAAATTAAAAGCAAGATATCCTCATCTGGGACAAAAGCCTGGAGGTTCAGATTTCTTAAGAAAACGATTAC
AGAAAGGGCAAAAATATTTTGATTCTGGGGATTACAACATGGCTAAAGCAAAAATGAAGAACAAACAACTTCCTACTGCA
GCCCCGGATAAGACGGAGGTCACTGGTGACCACATTCCCACTCCACAGGACCTTCCTCAACGGAAACCATCCCTTGTTGC
TAGCAAGCTGGCTGGCTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 19 .45 RPM
SRP012922_cerebellum 18 .28 RPM
SRP012922_heart 13 .23 RPM
SRP012922_kidney 9 .31 RPM
SRP012922_liver 8 .36 RPM
SRP012922_lung 21 .08 RPM
SRP012922_quadricep_muscle 70 .62 RPM
SRP012922_spleen 30 .79 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000011022 ortholog_one2one 5 retrogenes
retro_btau_1259, retro_btau_1821, retro_btau_1845, retro_btau_952, retro_btau_981,
Canis familiaris ENSCAFG00000032515 ortholog_one2one 2 retrogenes
retro_cfam_1375, retro_cfam_1402,
Cavia porcellus ENSCPOG00000011228 ortholog_one2one 1 retrogene
retro_cpor_1148,
Dipodomys ordii ENSDORG00000011321 ortholog_one2many 2 retrogenes
retro_dord_194, retro_dord_33,
Echinops telfairi ENSETEG00000015550 ortholog_one2one 1 retrogene
retro_etel_585,
Homo sapiens ENSG00000128989 ortholog_one2one 2 retrogenes
retro_hsap_2130, retro_hsap_3280,
Gorilla gorilla ENSGGOG00000025250 ortholog_one2many 1 retrogene
retro_ggor_198,
Nomascus leucogenys ENSNLEG00000006551 ortholog_one2one 2 retrogenes
retro_nleu_2533, retro_nleu_2884,
Oryctolagus cuniculus ENSOCUG00000015489 ortholog_one2one 10 retrogenes
retro_ocun_1182, retro_ocun_1297, retro_ocun_1398, retro_ocun_1573, retro_ocun_1731, retro_ocun_1768, retro_ocun_310, retro_ocun_473, retro_ocun_479, retro_ocun_698,
Otolemur garnettii ENSOGAG00000013865 possible_ortholog 1 retrogene
retro_ogar_591,
Pongo abelii ENSPPYG00000006487 ortholog_one2many 2 retrogenes
retro_pabe_120, retro_pabe_1923,
Pan troglodytes ENSPTRG00000042183 ortholog_one2one 1 retrogene
retro_ptro_1559,
Sus scrofa ENSSSCG00000004618 ortholog_one2one 1 retrogene
retro_sscr_603,
Ictidomys tridecemlineatus ENSSTOG00000003677 ortholog_one2one 7 retrogenes
retro_itri_1075, retro_itri_1290, retro_itri_1339, retro_itri_1643, retro_itri_1657, retro_itri_1865, retro_itri_594,
Tursiops truncatus ENSTTRG00000004804 ortholog_one2one 1 retrogene
retro_ttru_172,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_557 58.56 98.21
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2. retro_dnov_616 72.38 92.86
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3. retro_dnov_644 72.73 78.57
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4. retro_dnov_662 70.18 100.00
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5. retro_dnov_1086 64.36 90.18
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6. retro_dnov_1576 72.57 99.11
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7. retro_dnov_1960 64.22 95.54
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8. retro_dnov_2150 78.07 100.00
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9. retro_dnov_2427 71.56 96.43
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Download FASTA sequences of all ENSDNOG00000004474 retrocopies