RetrogeneDB ID: | retro_etel_585 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_922:178863..179166(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARPP19 | ||
Ensembl ID: | ENSETEG00000015550 | ||
Aliases: | None | ||
Description: | cAMP-regulated phosphoprotein, 19kDa [Source:HGNC Symbol;Acc:16967] |
Percent Identity: | 79.41 % |
Parental protein coverage: | 95.15 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MSAEIPEAASAEEQKEMEDKVTSPEKAEEAKLKARYPHLGQKPGGSDFLRKRLQKGXEKYFDLG-YNM-- |
MSAEIPEAASAEEQKEMEDKVTSPEKAEEAKLKARYPHLGQKPGGSDFLRKRLQKG..KYFD.G.YNM.. | |
Retrocopy | MSAEIPEAASAEEQKEMEDKVTSPEKAEEAKLKARYPHLGQKPGGSDFLRKRLQKG-QKYFDSGDYNMAK |
Parental | PQRKNKQLATAALGKAG-TGDHFPAPKHLPEQ |
...KNKQL.TAA..K...TGDH.P.P..LP.. | |
Retrocopy | AKMKNKQLPTAAPDKTEVTGDHIPTPQDLPQR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000011022 | 5 retrocopies | |
Canis familiaris | ENSCAFG00000032515 | 2 retrocopies | |
Cavia porcellus | ENSCPOG00000011228 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000004474 | 9 retrocopies | |
Dipodomys ordii | ENSDORG00000011321 | 2 retrocopies | |
Echinops telfairi | ENSETEG00000015550 | 1 retrocopy |
retro_etel_585 ,
|
Homo sapiens | ENSG00000128989 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000025250 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000006551 | 2 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000015489 | 10 retrocopies | |
Otolemur garnettii | ENSOGAG00000013865 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000006487 | 2 retrocopies | |
Pan troglodytes | ENSPTRG00000042183 | 1 retrocopy | |
Sus scrofa | ENSSSCG00000004618 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000003677 | 7 retrocopies | |
Tursiops truncatus | ENSTTRG00000004804 | 1 retrocopy |