Parental gene: | FAM213A, ENSDNOG00000001981 |
| Aliases: | None |
| Description: | family with sequence similarity 213, member A [Source:HGNC Symbol;Acc:28651] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_2463:8993..51839(+) |
>ENSDNOG00000001981
CCAAGGACCTTCAAAGCAAAGGAACTCTGGGAGAAGAATGGCGCCGTGATCATGGCCGTGCGGAGGCCAGGCTGCTTCCT
GTGTCGAGAGNNNNNNNNNNNNCTGTCCTCCCTCAAGCCCCAGCTGGACGCGCTGAGCATCCCCCTCTACGCCGTGGTAA
AGGAGCAGGTCGGGCATGAAGTGCAGGACTTCCAGCCGTATTTTAAAGGGGAAGTCTTCCTGGATGAAAAGAAGGAGTTC
TACGGTCCCCACAGACGGAAGATGATGCTCCTGGGGTTTGTCCGTTTGGGGGTCTGGTTCAACTTCCTCCGGGCCCGGAA
TGGAGGCTTCTCCGGAAACCTGGAAGGCGAAGGCTTCGTCCTCGGGGGAGTTTTTGTGGTGGGACCAGGAAAGCAGGGCA
TACTTCTCGAGCACCGAGAGAAAGAATTTGGAGACAAAGTAAGTCTAGTTTCTGTTCTGGAAGCTGCTAGAAAGATCGAA
CCACAGACCTCCACCTCTGAGAAGTGA
CCAAGGACCTTCAAAGCAAAGGAACTCTGGGAGAAGAATGGCGCCGTGATCATGGCCGTGCGGAGGCCAGGCTGCTTCCT
GTGTCGAGAGNNNNNNNNNNNNCTGTCCTCCCTCAAGCCCCAGCTGGACGCGCTGAGCATCCCCCTCTACGCCGTGGTAA
AGGAGCAGGTCGGGCATGAAGTGCAGGACTTCCAGCCGTATTTTAAAGGGGAAGTCTTCCTGGATGAAAAGAAGGAGTTC
TACGGTCCCCACAGACGGAAGATGATGCTCCTGGGGTTTGTCCGTTTGGGGGTCTGGTTCAACTTCCTCCGGGCCCGGAA
TGGAGGCTTCTCCGGAAACCTGGAAGGCGAAGGCTTCGTCCTCGGGGGAGTTTTTGTGGTGGGACCAGGAAAGCAGGGCA
TACTTCTCGAGCACCGAGAGAAAGAATTTGGAGACAAAGTAAGTCTAGTTTCTGTTCTGGAAGCTGCTAGAAAGATCGAA
CCACAGACCTCCACCTCTGAGAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 34 .62 RPM |
| SRP012922_cerebellum | 15 .67 RPM |
| SRP012922_heart | 7 .19 RPM |
| SRP012922_kidney | 104 .86 RPM |
| SRP012922_liver | 92 .57 RPM |
| SRP012922_lung | 13 .44 RPM |
| SRP012922_quadricep_muscle | 5 .02 RPM |
| SRP012922_spleen | 74 .29 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000813 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000003657 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000122378 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000013246 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000007485 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000021773 | ortholog_one2one | 3 retrogenes | |
| Mus musculus | ENSMUSG00000021792 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000013638 | ortholog_one2one | 7 retrogenes | |
| Procavia capensis | ENSPCAG00000009696 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025862 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000002685 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000011140 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_868 | 74.80 | 71.43 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_1843 | 70.25 | 72.02 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_1901 | 60.71 | 64.88 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000001981 retrocopies