Parental gene:

Fam213a, ENSRNOG00000011140

Aliases:RGD1309676, Fam213a, PAMM
Description:Redox-regulatory protein FAM213A [Source:UniProtKB/Swiss-Prot;Acc:Q6AXX6]
Organism:Rat (Rattus norvegicus)
Coordinates:16:17376840..17396620(+)


>ENSRNOG00000011140
ATGTCTTTTCTCCAGGACTCAAGTTTCTTTTCCATGGGTATGTGGTCCATCGGTGTGGGAGCTTTTGGGGCTGCTGCACT
GGCACTGCTCCTGGCCAACACAGACATGTTTCTCTCTAAGCCCCAAAAGGCGGCACTGGAATATTTGGAAGACATAGATC
TGAAAACACTGGAGAAAGAACCAAGGACATTCAAAGCAAAGGAGCTATGGGAAAAGAATGGGGCTGTGATTATGGCTGTG
CGAAGGCCAGGCTGCTTCCTCTGTCGAGCGGAAGCAGCAGATCTGATGTCCTTGAAGCCCAAGCTGGATGAGCTAGGTGT
CCCTCTCTACGCAGTGGTGAAGGAGAAGGTCAAGAGGGAAGTGGAGGATTTCCAGCCTTACTTCAAAGGGGAAATCTTCC
TGGATGAAAAGAAAAAGTTCTATGGTCCAGAGAGGCGGAAGATGATGCTTATGGGCCTCGTGCGTTTGGGTGTGTGGTAT
AACTCCTTCCGGGCCTGGAAGGGAGGCTTCTCTGGAAACTTTGAAGGCGAAGGCTTCATCCTCGGAGGGGTTTTTGTGAT
AGGATCTGGAAAGCAGGGCGTTCTTCTTGAGCACCGAGAAAAAGAGTTTGGAGACAGAGTGAACCTGCTCTCTGTTCTGG
AAGCCGTAAAGAAGATCAAGCCACAGACCCCAGCCTCCAGGCAAAGCTGA

Library Parental gene expression (RPM)
SRP017611_brain 38 .68 RPM
SRP017611_kidney 25 .68 RPM
SRP017611_liver 40 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000813 ortholog_one2one 1 retrogene
retro_chof_878,
Callithrix jacchus ENSCJAG00000003657 ortholog_one2one 1 retrogene
retro_cjac_3312,
Dasypus novemcinctus ENSDNOG00000001981 ortholog_one2one 3 retrogenes
retro_dnov_1843, retro_dnov_1901, retro_dnov_868,
Homo sapiens ENSG00000122378 ortholog_one2one 2 retrogenes
retro_hsap_1135, retro_hsap_4076,
Gorilla gorilla ENSGGOG00000013246 ortholog_one2one 2 retrogenes
retro_ggor_2733, retro_ggor_886,
Microcebus murinus ENSMICG00000007485 ortholog_one2one 2 retrogenes
retro_mmur_1346, retro_mmur_1481,
Macaca mulatta ENSMMUG00000021773 ortholog_one2one 3 retrogenes
retro_mmul_2351, retro_mmul_2409, retro_mmul_881,
Mus musculus ENSMUSG00000021792 ortholog_one2one 1 retrogene
retro_mmus_2227,
Otolemur garnettii ENSOGAG00000013638 ortholog_one2one 7 retrogenes
retro_ogar_2126, retro_ogar_2435, retro_ogar_2562, retro_ogar_3327, retro_ogar_420, retro_ogar_580, retro_ogar_784,
Procavia capensis ENSPCAG00000009696 ortholog_one2one 1 retrogene
retro_pcap_281,
Pongo abelii ENSPPYG00000025862 ortholog_one2one 4 retrogenes
retro_pabe_3345, retro_pabe_643, retro_pabe_738, retro_pabe_944,
Pan troglodytes ENSPTRG00000002685 ortholog_one2one 2 retrogenes
retro_ptro_2763, retro_ptro_774,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1517 70.79 77.29
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Download FASTA sequences of all ENSRNOG00000011140 retrocopies