Parental gene:

TUBA1A, ENSDNOG00000004121

Aliases:None
Description:tubulin, alpha 1a [Source:HGNC Symbol;Acc:20766]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:scaffold_10235:64347..68141(+)


>ENSDNOG00000004121
ATGCGTGAGTGCATCTCCATCCACGTCGGCCAGGCTGGTGTCCAGATTGGCAATGCCTGCTGGGAGCTCTACTGCCTGGA
ACACGGCATCCAGCCCGATGGCCAGATGCCAAGTGACAAGACCATTGGGGGAGGAGATGACTCCTTCAACACCTTCTTCA
GTGAGACCGGCGCTGGCAAGCATGTGCCCAGGGCAGTGTTTGTAGACCTGGAACCCACAGTCATTGATGAAGTTCGCACT
GGCACCTACCGCCAGCTCTTCCACCCTGAGCAGCTCATCACAGGCAAGGAAGATGCTGCCAATAACTATGCCCGCGGGCA
TTACACCATCGGCAAGGAGATCATCGACCTGGTTCTGGACAGAATTCGCAAACTGGCCGACCAGTGCACAGGGCTTCAGG
GCTTCTTGGTTTTCCACAGCTTTGGTGGGGGAACCGGTTCTGGGTTCACCTCCCTGCTGATGGAACGCCTTTCTGTTGAT
TACGGCAAGAAGTCCAAGCTGGAGTTCTCCATTTACCCAGCCCCCCAGGTCTCCACAGCTGTGGTCGAGCCCTACAACTC
CATCCTCACCACCCACACCACCCTGGAGCACTCAGATTGTGCCTTCATGGTAGACAATGAGGCCATCTATGACATCTGTC
GCAGAAATCTTGATATTGAGCGCCCAACCTACACCAATCTGAATAGGTTGATAGGTCAGATTGTGTCCTCCATCACAGCT
TCCCTCAGGTTTGATGGTGCCCTGAATGTAGATCAGACAGAATTCCCGACCAAGCTGGTGCCCTATCCTCACATCCACTT
TCCTCTAGCCACGTATGCCCCTATCATCTCTGTTGAGAAGGCCTATCATGAGCAGCTTTCTGTAGCAGAGATTACCAGTG
TTTGCTTTGAGCTAGCCAACCAGATGGTGAAATGCGACCCTCGCCACGGTAAATACATGGCCTGCTGCCTGTTGTACCGG
GGCGACGTGGTTCCCAAAGACGTCAATGCTGCCATTGCCACCATCAAGACCAAGCGCACCATCCAGTTTGTGGACTGGTG
TCCCACTGGCTTCAAGGTCGGCATTAATTACCAGCCTCCCACTGTGGTTCCTGGTGGCGACCTGGCCAAGGTGCAGCGAG
CTGTGTGCATGCTGAGCAACACCACAGCCATTGCTGAGGCCTGGGCTCGCCTGGACCACAAGTTTGACCTGATGTACGCC
AAACATGCCTTTGTTCACTGTTACATGAGGGAGGGAATGGAGGAAGGAGAGTTTTCTGAGGCTCATGAGAACATGGCTGC
CCTTAAGAAGGATTATGAGGAGGTTGGTGTAGATTCTGTTGAAGGAGAGGGTGAGGAAGAAGGAGAAGACTATCAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 26 .64 RPM
SRP012922_cerebellum 155 .89 RPM
SRP012922_heart 18 .56 RPM
SRP012922_kidney 14 .51 RPM
SRP012922_liver 6 .50 RPM
SRP012922_lung 53 .00 RPM
SRP012922_quadricep_muscle 11 .94 RPM
SRP012922_spleen 47 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000001489 ortholog_one2one 3 retrogenes
retro_btau_251, retro_btau_350, retro_btau_929,
Callithrix jacchus ENSCJAG00000020894 ortholog_one2one 2 retrogenes
retro_cjac_1209, retro_cjac_3157,
Equus caballus ENSECAG00000013798 ortholog_one2one 1 retrogene
retro_ecab_223,
Homo sapiens ENSG00000167552 ortholog_one2one 1 retrogene
retro_hsap_3313,
Nomascus leucogenys ENSNLEG00000017836 ortholog_one2many 2 retrogenes
retro_nleu_245, retro_nleu_2757,
Oryctolagus cuniculus ENSOCUG00000027812 ortholog_one2one 1 retrogene
retro_ocun_197,
Pteropus vampyrus ENSPVAG00000004645 ortholog_one2one 2 retrogenes
retro_pvam_1283, retro_pvam_414,
Rattus norvegicus ENSRNOG00000004559 ortholog_one2one 3 retrogenes
retro_rnor_1200, retro_rnor_2006, retro_rnor_446,
Vicugna pacos ENSVPAG00000005749 ortholog_one2one 4 retrogenes
retro_vpac_157, retro_vpac_210, retro_vpac_429, retro_vpac_72,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_43 94.00 99.56
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSDNOG00000004121 retrocopies